RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SOX5P35711 763 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 ADCYAP1R1P41586 468 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 ARID5AQ03989 594 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 PTK2Q05397 1052 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 LAMTOR4Q0VGL1 99 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 DRP2Q13474 957 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
VPS33B-205ENST00000556096 DUSP28Q4G0W2 176 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 KRT39Q6A163 491 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 PHLDB3Q6NSJ2 640 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 ZPBP2Q6X784 338 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 USP6NLQ92738 828 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 C2orf40Q9H1Z8 148 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 AGO2Q9UKV8 859 aaKnown RBP15.96■□□□□ 0.15
VPS33B-205ENST00000556096 TFR2Q9UP52 801 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 ASAP2O43150 1006 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 GFPT2O94808 682 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 HOXC6P09630 235 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 CCDC172P0C7W6 258 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 CYP2B6P20813 491 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 CLDN10P78369 228 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-205ENST00000556096 ZNF571Q7Z3V5 609 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-205ENST00000556096 GPIHBP1Q8IV16 184 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 FAM213AQ9BRX8 229 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 RNPEPQ9H4A4 650 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 SUGCTQ9HAC7 445 aa15.95■□□□□ 0.14
VPS33B-205ENST00000556096 A0A087X0T9 212 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 A0A0B4J269 797 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 FAM228BP0C875 321 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 HOXD8P13378 290 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 FLT3LGP49771 235 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 PSMD6Q15008 389 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 ZBTB8OSQ8IWT0 167 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 AFG1LQ8WV93 481 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 SECISBP2LQ93073 1101 aaKnown RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 CCDC127Q96BQ5 260 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 GPR88Q9GZN0 384 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 SUCLA2Q9P2R7 463 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 ADAMTS1Q9UHI8 967 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 DUSP10Q9Y6W6 482 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 COL1A2P08123 1366 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 ATP8B3O60423 1300 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 MAGEB2O15479 319 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 MSCO60682 206 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 SMPD1P17405 629 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 GPC3P51654 580 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 TFDP1Q14186 410 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 EFCAB12Q6NXP0 572 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 VPS36Q86VN1 386 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 LRRC71Q8N4P6 559 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 RNF10Q8N5U6 811 aaKnown RBP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 SOCS4Q8WXH5 440 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 C16orf70Q9BSU1 422 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS33B-205ENST00000556096 FLRT1Q9NZU1 646 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 CDC23Q9UJX2 597 aa15.94■□□□□ 0.14
VPS33B-205ENST00000556096 EVI5O60447 810 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 C22orf31O95567 290 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 INSRRP14616 1297 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 RGS2P41220 211 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 BMS1Q14692 1282 aaKnown RBP15.93■□□□□ 0.14
VPS33B-205ENST00000556096 CCL14Q16627 93 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 CRELD2Q6UXH1 353 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-205ENST00000556096 FBXL13Q8NEE6 735 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 TRIM58Q8NG06 486 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 TSC1Q92574 1164 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 MRPL4Q9BYD3 311 aaKnown RBP15.93■□□□□ 0.14
VPS33B-205ENST00000556096 HAPLN2Q9GZV7 340 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 UBE2TQ9NPD8 197 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-205ENST00000556096 SRRDQ9UH36 339 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 NENFQ9UMX5 172 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 PTCH2Q9Y6C5 1203 aa15.93■□□□□ 0.14
VPS33B-205ENST00000556096 ANO9A1A5B4 782 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 TACC1O75410 805 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 EDN1P05305 212 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 SRGAP2CP0DJJ0 459 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 ELNP15502 786 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 NAB2Q15742 525 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 ENOX2Q16206 610 aaKnown RBP15.92■□□□□ 0.14
VPS33B-205ENST00000556096 MAPK6Q16659 721 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 C15orf39Q6ZRI6 1047 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 SV2AQ7L0J3 742 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 ARHGEF19Q8IW93 802 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 RNF149Q8NC42 400 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 ZBTB45Q96K62 511 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-205ENST00000556096 POP1Q99575 1024 aaKnown RBP15.92■□□□□ 0.14
VPS33B-205ENST00000556096 APBA2Q99767 749 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 MSTO1Q9BUK6 570 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 CARD6Q9BX69 1037 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 NFKBIZQ9BYH8 718 aa15.92■□□□□ 0.14
VPS33B-205ENST00000556096 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms