RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 COL4A1P02462 1669 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 THAP12O43422 761 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 COMTP21964 271 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 MARK3P27448 753 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PTPN4P29074 926 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 FOXN2P32314 431 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 FMO5P49326 533 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 CDK8P49336 464 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 CASP4P49662 377 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 GPC5P78333 572 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 OR52E8Q6IFG1 317 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 FAM186BQ8IYM0 893 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 SLFN12Q8IYM2 578 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 ERMNQ8TAM6 284 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 LRRC8CQ8TDW0 803 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 CD101Q93033 1021 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 GORASP1Q9BQQ3 440 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 GPR88Q9GZN0 384 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 FAM192AQ9GZU8 254 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 ANKRD2Q9GZV1 360 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 KIAA1683Q9H0B3 1180 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 GLT8D2Q9H1C3 349 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 SEPT11Q9NVA2 429 aaKnown RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 TAS2R14Q9NYV8 317 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 APEX2Q9UBZ4 518 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 USP17L5A8MUK1 530 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PDLIM1O00151 329 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 HGSO14964 777 aaPredicted RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 MED24O75448 989 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 RNF8O76064 485 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PYGMP11217 842 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 MARCKSL1P49006 195 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 RNF207Q6ZRF8 634 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 CEP128Q6ZU80 1094 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 RELL1Q8IUW5 271 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 SRRM1Q8IYB3 904 aaKnown RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 MAIP1Q8WWC4 291 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 REEP2Q9BRK0 252 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 INTS2Q9H0H0 1204 aaKnown RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 DENND2DQ9H6A0 471 aaPredicted RBP8.32□□□□□ -1.08
CHD8-209ENST00000555935 NMRK1Q9NWW6 199 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PHTF1Q9UMS5 762 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 DNM3Q9UQ16 869 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 ZNF652Q9Y2D9 606 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 PCDHB13Q9Y5F0 798 aa8.32□□□□□ -1.08
CHD8-209ENST00000555935 ITGB4P16144 1822 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 SIGLEC16A6NMB1 481 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 IRF6O14896 467 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TP73O15350 636 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 EIF3DO15371 548 aaKnown RBP eCLIP8.31□□□□□ -1.083e-6■■■■□ 21.5
CHD8-209ENST00000555935 SORBS3O60504 671 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TBCAO75347 108 aaKnown RBP8.31□□□□□ -1.08
CHD8-209ENST00000555935 ASMTLO95671 621 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
CHD8-209ENST00000555935 LDHCP07864 332 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 BCRP11274 1271 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 GAP43P17677 238 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 MUTP22033 750 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 KLRK1P26718 216 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 RFC5P40937 340 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 KRT17Q04695 432 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 RNASELQ05823 741 aaKnown RBP8.31□□□□□ -1.08
CHD8-209ENST00000555935 PTK6Q13882 451 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 SPARCL1Q14515 664 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 UBE2SQ16763 222 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 SLC45A4Q5BKX6 768 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 FAM47EQ6ZV65 393 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 ARHGAP22Q7Z5H3 698 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 ARHGAP18Q8N392 663 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 WDR66Q8TBY9 1149 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 ZNF398Q8TD17 642 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 GRK7Q8WTQ7 553 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 FGD4Q96M96 766 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TUBB6Q9BUF5 446 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 CCDC28BQ9BUN5 200 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TIPINQ9BVW5 301 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 DNAJC18Q9H819 358 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 OLFML3Q9NRN5 406 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 NINJ2Q9NZG7 142 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 PDP2Q9P2J9 529 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 ASIC3Q9UHC3 531 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 NAALADL1Q9UQQ1 740 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 MYO3BQ8WXR4 1341 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 CYP3A7-CYP3A51PA0A087WV96 503 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 MAGEA13PA6NCF6 341 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
CHD8-209ENST00000555935 PRPF4O43172 522 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD8-209ENST00000555935 EDF1O60869 148 aaKnown RBP8.31□□□□□ -1.08
CHD8-209ENST00000555935 UPP2O95045 317 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms