RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 STK11Q15831 433 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 PDXDC2PQ6P474 469 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 CSGALNACT2Q8N6G5 542 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 SIKE1Q9BRV8 207 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 AP3B1O00203 1094 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 CDK2AP1O14519 115 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 EPHB6O15197 1021 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 NKRFO15226 690 aaKnown RBP eCLIP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 TMCC2O75069 709 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 DGKIO75912 1065 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 B2MP61769 119 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 GPSM2P81274 684 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 DHX9Q08211 1270 aaKnown RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 NEK5Q6P3R8 708 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 ATG9AQ7Z3C6 839 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 PPFIBP2Q8ND30 876 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 ATXN2LQ8WWM7 1075 aaKnown RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 NOC4LQ9BVI4 516 aaKnown RBP11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 RAB17Q9H0T7 212 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 MOSPD1Q9UJG1 213 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 TSC22D4Q9Y3Q8 395 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
EFCAB11-208ENST00000555872 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 ARPC4-TTLL3A0A0A6YYG9 625 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 TLDC2A0PJX2 215 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 TNFRSF10AO00220 468 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 DAPK3O43293 454 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 MYBP10242 640 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 RAD23BP54727 409 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 TBC1D9BQ66K14 1250 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 TLCD1Q96CP7 247 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 EGLN2Q96KS0 407 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 FGD4Q96M96 766 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 TBCBQ99426 244 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 INTS9Q9NV88 658 aaKnown RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 EXOC7Q9UPT5 735 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 BTAF1O14981 1849 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 ECM29Q5VYK3 1845 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 A0A087WZG4 1122 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 SMIM23A6NLE4 172 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 DEXIO95424 95 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 BAG6P46379 1132 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 RRAGAQ7L523 313 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 SGMS1Q86VZ5 419 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 PBKQ96KB5 322 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 PRPF18Q99633 342 aaKnown RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 SEC63Q9UGP8 760 aaKnown RBP11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 PCDHB2Q9Y5E7 798 aa11.04□□□□□ -0.64
EFCAB11-208ENST00000555872 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 PSMA7O14818 248 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 MUSKO15146 869 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 SNX3O60493 162 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 LCA5LO95447 670 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 GBP1P32455 592 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 ADD2P35612 726 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 ACADSBP45954 432 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 RGS19P49795 217 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 PTGDRQ13258 359 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 RTN1Q16799 776 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 GALNTL6Q49A17 601 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 IGSF11Q5DX21 431 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 TMC3Q7Z5M5 1100 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 CASP10Q92851 521 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 PCDHGB3Q9Y5G1 929 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 LY75O60449 1722 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 M0QX08 132 aa11.03□□□□□ -0.64
EFCAB11-208ENST00000555872 PJA2O43164 708 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms