RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 PANK2Q9BZ23 570 aa25.1■■□□□ 1.61
CDKN3-208ENST00000555837 USP25Q9UHP3 1055 aa25.1■■□□□ 1.61
CDKN3-208ENST00000555837 ITGB1P05556 798 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 MCF2P10911 925 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 BCAR1P56945 870 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 GRIK3Q13003 919 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 ZNF568Q3ZCX4 644 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 AXDND1Q5T1B0 1012 aaPredicted RBP25.09■■□□□ 1.61
CDKN3-208ENST00000555837 MPZL3Q6UWV2 235 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 LRRC55Q6ZSA7 311 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 CEP57L1Q8IYX8 460 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 SPPL3Q8TCT6 385 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 MICAL1Q8TDZ2 1067 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 POF1BQ8WVV4 589 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 NXF3Q9H4D5 531 aaKnown RBP25.09■■□□□ 1.61
CDKN3-208ENST00000555837 ST6GALNAC4Q9H4F1 302 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 ALG13Q9NP73 1137 aaKnown RBP25.09■■□□□ 1.61
CDKN3-208ENST00000555837 NGRNQ9NPE2 291 aaKnown RBP25.09■■□□□ 1.61
CDKN3-208ENST00000555837 TLR9Q9NR96 1032 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 EXOC7Q9UPT5 735 aa25.09■■□□□ 1.61
CDKN3-208ENST00000555837 COL4A4P53420 1690 aaPredicted RBP25.08■■□□□ 1.61
CDKN3-208ENST00000555837 NPHP3-ACAD11A0A0J9YXS1 232 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 GRM6O15303 877 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 CLDN3O15551 220 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 MLH1P40692 756 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 NT5DC1Q5TFE4 455 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 RESP18Q5W5W9 173 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 SHC4Q6S5L8 630 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 DYMQ7RTS9 669 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 LEO1Q8WVC0 666 aaPredicted RBP25.08■■□□□ 1.61
CDKN3-208ENST00000555837 GAD1Q99259 594 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 FAN1Q9Y2M0 1017 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 ZDHHC9Q9Y397 364 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 PCDHB13Q9Y5F0 798 aa25.08■■□□□ 1.61
CDKN3-208ENST00000555837 CHD7Q9P2D1 2997 aa25.08■■□□□ 1.6
CDKN3-208ENST00000555837 IDEP14735 1019 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 CMA1P23946 247 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 MATR3P43243 847 aaKnown RBP eCLIP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 LIG4P49917 911 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 CACNB1Q02641 598 aaPredicted RBP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 CDR2LQ86X02 465 aaPredicted RBP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 ATXN2LQ8WWM7 1075 aaKnown RBP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 DHX58Q96C10 678 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 TARS2Q9BW92 718 aaKnown RBP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 GBP3Q9H0R5 595 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 NRDE2Q9H7Z3 1164 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 THEGQ9P2T0 379 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 KCNH3Q9ULD8 1083 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 CIZ1Q9ULV3 898 aaPredicted RBP25.07■■□□□ 1.6
CDKN3-208ENST00000555837 TBX20Q9UMR3 447 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 HES2Q9Y543 173 aa25.07■■□□□ 1.6
CDKN3-208ENST00000555837 HNRNPDLO14979 420 aaKnown RBP25.06■■□□□ 1.6
CDKN3-208ENST00000555837 POLR2DO15514 142 aaKnown RBP25.06■■□□□ 1.6
CDKN3-208ENST00000555837 POMCP01189 267 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 GRM5P41594 1212 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 GTF2BQ00403 316 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 SLFN12LQ6IEE8 588 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 SLC39A11Q8N1S5 342 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 TMEM87AQ8NBN3 555 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 HLA-CQ95604 372 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 COLEC11Q9BWP8 271 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 MRPL44Q9H9J2 332 aaKnown RBP25.06■■□□□ 1.6
CDKN3-208ENST00000555837 OLFML3Q9NRN5 406 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 KBTBD4Q9NVX7 518 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 SSX2IPQ9Y2D8 614 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 TRANK1O15050 2925 aa25.06■■□□□ 1.6
CDKN3-208ENST00000555837 GOLGA6L4A6NEF3 574 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 MYMKA6NI61 221 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 MEIS3P2A8K0S8 358 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 RBAK-RBAKDNI3L0D1 243 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 THP07101 528 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 GALTP07902 379 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 AKAP5P24588 427 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 NOLC1Q14978 699 aaKnown RBP eCLIP25.05■■□□□ 1.6
CDKN3-208ENST00000555837 HERC4Q5GLZ8 1057 aaPredicted RBP25.05■■□□□ 1.6
CDKN3-208ENST00000555837 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.05■■□□□ 1.6
CDKN3-208ENST00000555837 ACAP3Q96P50 834 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 CDCA3Q99618 268 aaPredicted RBP25.05■■□□□ 1.6
CDKN3-208ENST00000555837 PTPRHQ9HD43 1115 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 SLC38A7Q9NVC3 462 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 PANK4Q9NVE7 773 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 SNTG2Q9NY99 539 aa25.05■■□□□ 1.6
CDKN3-208ENST00000555837 RECQL4O94761 1208 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 MYL1P05976 194 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 SRGAP2BP0DMP2 458 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 CNNM4Q6P4Q7 775 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 LRRC15Q8TF66 581 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 IGSF21Q96ID5 467 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 RNF39Q9H2S5 420 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 ENTPD7Q9NQZ7 604 aa25.04■■□□□ 1.6
CDKN3-208ENST00000555837 PIGRP01833 764 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 PROZP22891 400 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 SCNN1GP51170 649 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 SMC1AQ14683 1233 aaKnown RBP25.03■■□□□ 1.6
CDKN3-208ENST00000555837 POSTNQ15063 836 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 E2F4Q16254 413 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 EEF1DP3Q658K8 133 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 TAS1R3Q7RTX0 852 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 ZNF720Q7Z2F6 126 aa25.03■■□□□ 1.6
CDKN3-208ENST00000555837 TMC7Q7Z402 723 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms