RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CCDC191Q8NCU4 936 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
ATXN3-233ENST00000555816 PTPN18Q99952 460 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 SEC61A2Q9H9S3 476 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 ASH2LQ9UBL3 628 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 ADAM29Q9UKF5 820 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 CROTQ9UKG9 612 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 FZD1Q9UP38 647 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 TESMINQ9Y4I5 508 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 MED23Q9ULK4 1368 aa6.21□□□□□ -1.41
ATXN3-233ENST00000555816 NUP98P52948 1817 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 PATE3B3GLJ2 98 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 TACR2P21452 398 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
ATXN3-233ENST00000555816 PRMT2P55345 433 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 SF1Q15637 639 aaKnown RBP6.21□□□□□ -1.42
ATXN3-233ENST00000555816 KRT24Q2M2I5 525 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 IGDCC4Q8TDY8 1250 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 SH3RF3Q8TEJ3 882 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-233ENST00000555816 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
ATXN3-233ENST00000555816 LGR4Q9BXB1 951 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 DEF6Q9H4E7 631 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 JADE2Q9NQC1 790 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 DLL4Q9NR61 685 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 CWC25Q9NXE8 425 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-233ENST00000555816 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.42
ATXN3-233ENST00000555816 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 GPR42O15529 346 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 LCP1P13796 627 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
ATXN3-233ENST00000555816 RBL2Q08999 1139 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 KIF22Q14807 665 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 PRSS53Q2L4Q9 553 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 TRMT10BQ6PF06 316 aaKnown RBP6.2□□□□□ -1.42
ATXN3-233ENST00000555816 CRIP3Q6Q6R5 217 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 ZCCHC14Q8WYQ9 949 aaKnown RBP6.2□□□□□ -1.42
ATXN3-233ENST00000555816 SGSM3Q96HU1 749 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 MYD88Q99836 296 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 ZFYVE21Q9BQ24 234 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 FBXL7Q9UJT9 491 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 TCAF1Q9Y4C2 921 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
ATXN3-233ENST00000555816 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
ATXN3-233ENST00000555816 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 B4GALT4O60513 344 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 FZD7O75084 574 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 C6P13671 934 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 ETFBP38117 255 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
ATXN3-233ENST00000555816 SELENOPP49908 381 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 RASA3Q14644 834 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 ICAM4Q14773 271 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 CDSNQ15517 529 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 VASNQ6EMK4 673 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-233ENST00000555816 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
ATXN3-233ENST00000555816 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 CLRN2A0PK11 232 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 ENO2P09104 434 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 ACVRL1P37023 503 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 KCNJ4P48050 445 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 HSP90AA2PQ14568 343 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 SMAD2Q15796 467 aaKnown RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 CFAP100Q494V2 611 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 DPH6Q7L8W6 267 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 SPRED1Q7Z699 444 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 DTX3Q8N9I9 347 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 DCAF4Q8WV16 495 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 ZSWIM3Q96MP5 696 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 GREM2Q9H772 168 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 VEZTQ9HBM0 779 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-233ENST00000555816 ZDHHC9Q9Y397 364 aa6.18□□□□□ -1.42
ATXN3-233ENST00000555816 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms