RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CNOT4O95628 575 aaKnown RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 JUNP05412 331 aaKnown RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 POU2F2P09086 479 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 CT47B1P0C2W7 299 aaPredicted RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 EDNRBP24530 442 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 KIF23Q02241 960 aaPredicted RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 UBE3CQ15386 1083 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 SURF1Q15526 300 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 ZNF568Q3ZCX4 644 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 TPH2Q8IWU9 490 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 MYO1HQ8N1T3 1032 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 MSL3Q8N5Y2 521 aaKnown RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 PPM1NQ8N819 430 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 NRG4Q8WWG1 115 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 RABGGTAQ92696 567 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 C8orf48Q96LL4 319 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 KCNC2Q96PR1 638 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 SEC61A2Q9H9S3 476 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 DMRT3Q9NQL9 472 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 SAP30BPQ9UHR5 308 aaKnown RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 FAM184BQ9ULE4 1060 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 CPS1P31327 1500 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 MATN2O00339 956 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 PRPF3O43395 683 aaKnown RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 B4GALT4O60513 344 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 PRAMEF4O60810 478 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 TOX4O94842 621 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 ENDOD1O94919 500 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 GASTP01350 101 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 ZSCAN22P10073 491 aaPredicted RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 GSPT1P15170 499 aaKnown RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 LPOP22079 712 aaPredicted RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 EPHB4P54760 987 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 ATP2C1P98194 919 aaPredicted RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 SEPT2Q15019 361 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 MLC1Q15049 377 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 ATAT1Q5SQI0 421 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 CCDC181Q5TID7 509 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 LCNL1Q6ZST4 164 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 Q6ZVL8 140 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 EPM2AIP1Q7L775 607 aaPredicted RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 LILRA3Q8N6C8 439 aaPredicted RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 OR2I1PQ8NGU4 316 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.38□□□□□ -1.71
SRP54-209ENST00000555746 ZNF480Q8WV37 535 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 ENKD1Q9H0I2 346 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 SLC12A5Q9H2X9 1139 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 BCO1Q9HAY6 547 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 GEMIN8Q9NWZ8 242 aaKnown RBP4.38□□□□□ -1.71
SRP54-209ENST00000555746 ING3Q9NXR8 418 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 LIMCH1Q9UPQ0 1083 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 NR2E1Q9Y466 385 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 RAPGEF6Q8TEU7 1601 aa4.38□□□□□ -1.71
SRP54-209ENST00000555746 WDR7Q9Y4E6 1490 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 RUSC2Q8N2Y8 1516 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ABCA10Q8WWZ4 1543 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 CCDC154A6NI56 674 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 NRP1O14786 923 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 SLC26A4O43511 780 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 AKR1B10O60218 316 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 SASH1O94885 1247 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 PDCP20941 246 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 CRHR1P34998 444 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 BPIFB4P59827 614 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 RAC3P60763 192 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 PPP2CBP62714 309 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 PPP2CAP67775 309 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 NOMO1Q15155 1222 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 HSP90AB2PQ58FF8 381 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ZFYVE27Q5T4F4 411 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ZNF772Q68DY9 489 aaPredicted RBP4.37□□□□□ -1.71
SRP54-209ENST00000555746 LILRA6Q6PI73 481 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 B3GNT9Q6UX72 402 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 USP45Q70EL2 814 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ADGRE4PQ86SQ3 457 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ANKRD53Q8N9V6 530 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 SYT8Q8NBV8 401 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 OR14K1Q8NGZ2 314 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 TTC8Q8TAM2 541 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 HPS3Q969F9 1004 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 HDAC10Q969S8 669 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 GTPBP4Q9BZE4 634 aaKnown RBP4.37□□□□□ -1.71
SRP54-209ENST00000555746 XYLT2Q9H1B5 865 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 NMRK2Q9NPI5 230 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 TLR9Q9NR96 1032 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 TRPS1Q9UHF7 1281 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 PUF60Q9UHX1 559 aaKnown RBP4.37□□□□□ -1.71
SRP54-209ENST00000555746 INTUQ9ULD6 942 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 DNM3Q9UQ16 869 aa4.37□□□□□ -1.71
SRP54-209ENST00000555746 ARHGEF40Q8TER5 1519 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 LRRC7Q96NW7 1537 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 CAMSAP1Q5T5Y3 1602 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ZCCHC11Q5TAX3 1644 aaKnown RBP4.36□□□□□ -1.71
SRP54-209ENST00000555746 SIGLEC1Q9BZZ2 1709 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms