RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 H3BQ06 376 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 B4GALT3O60512 393 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 TBX10O75333 385 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 LETM1O95202 739 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 GTF2F1P35269 517 aaKnown RBP eCLIP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 BCAR1P56945 870 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 ERVFC1P60507 584 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 PPP2R5AQ15172 486 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 E2F4Q16254 413 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 LONRF3Q496Y0 759 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 TMEM119Q4V9L6 283 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 SLC27A1Q6PCB7 646 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 KCNK18Q7Z418 384 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 TMEM173Q86WV6 379 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 ELOA2Q8IYF1 753 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 DAW1Q8N136 415 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 DEPTORQ8TB45 409 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 URGCPQ8TCY9 931 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 NECAB3Q96P71 396 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 PLIN2Q99541 437 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 LRRC27Q9C0I9 530 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 TNMDQ9H2S6 317 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 NXF3Q9H4D5 531 aaKnown RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 UBN1Q9NPG3 1134 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 SERTAD1Q9UHV2 236 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 PUF60Q9UHX1 559 aaKnown RBP10.6□□□□□ -0.71
ACTN1-215ENST00000555616 DNM3Q9UQ16 869 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 INPP5FQ9Y2H2 1132 aa10.6□□□□□ -0.71
ACTN1-215ENST00000555616 E9PMD0 336 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 LINC01565O15544 149 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 ZC3H11AO75152 810 aaKnown RBP eCLIP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 ITGA4P13612 1032 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 GUCY2CP25092 1073 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 MLH1P40692 756 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 NRIP1P48552 1158 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 SLC11A1P49279 550 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 ALDH7A1P49419 539 aaKnown RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 AFF1P51825 1210 aaKnown RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 EFNA5P52803 228 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 AMPD3Q01432 767 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 KRT17Q04695 432 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 MAPK7Q13164 816 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 ADAM15Q13444 863 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 DUSP6Q16828 381 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 PTCRAQ6ISU1 281 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 SV2BQ7L1I2 683 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 HACE1Q8IYU2 909 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 BCL7CQ8WUZ0 217 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 RAD54LQ92698 747 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 TMEM169Q96HH4 297 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 CDCA3Q99618 268 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 TCF25Q9BQ70 676 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 KIFC3Q9BVG8 833 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 TIPINQ9BVW5 301 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 PDZD7Q9H5P4 517 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 NRDE2Q9H7Z3 1164 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 NGRNQ9NPE2 291 aaKnown RBP10.59□□□□□ -0.71
ACTN1-215ENST00000555616 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
ACTN1-215ENST00000555616 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.71
ACTN1-215ENST00000555616 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 ARL5CA6NH57 179 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 ACKR2O00590 384 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 N4BP3O15049 544 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 GLP2RO95838 553 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 EDN1P05305 212 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 PRKCBP05771 671 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 MYL1P05976 194 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 GALTP07902 379 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 RNASELQ05823 741 aaKnown RBP10.58□□□□□ -0.72
ACTN1-215ENST00000555616 DLX2Q07687 328 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-215ENST00000555616 DSC1Q08554 894 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
ACTN1-215ENST00000555616 POSTNQ15063 836 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 CAMK4Q16566 473 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 MAPK6Q16659 721 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 PLPP4Q5VZY2 271 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 C1orf186Q6ZWK4 172 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 ZNF280BQ86YH2 543 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 IGSF21Q96ID5 467 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 MSLNLQ96KJ4 702 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 IFT74Q96LB3 600 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM175Q9BSA9 504 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 TRIM6Q9C030 488 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-215ENST00000555616 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 IGFLR1Q9H665 355 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 TLE6Q9H808 572 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 ENTPD7Q9NQZ7 604 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms