RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GPBP1Q86WP2 473 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 HACE1Q8IYU2 909 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 EFHBQ8N7U6 833 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 RASSF8Q8NHQ8 419 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 RAD54LQ92698 747 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 TMEM169Q96HH4 297 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 UHRF1Q96T88 793 aaPredicted RBP22.58■■□□□ 1.21
VTI1B-205ENST00000555543 TLE6Q9H808 572 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 C17orf75Q9HAS0 396 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 KCND2Q9NZV8 630 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 PARP2Q9UGN5 583 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 PLS3P13797 630 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 NASPP49321 788 aaPredicted RBP22.57■■□□□ 1.2
VTI1B-205ENST00000555543 DSC1Q08554 894 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 PKP1Q13835 747 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 SLC39A14Q15043 492 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 ATF7IP2Q5U623 682 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 TMC7Q7Z402 723 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 COLGALT2Q8IYK4 626 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 VN1R2Q8NFZ6 395 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 FAM193BQ96PV7 902 aaPredicted RBP22.57■■□□□ 1.2
VTI1B-205ENST00000555543 REEP2Q9BRK0 252 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 CXCL16Q9H2A7 254 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 TMEM134Q9H6X4 195 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 SNTG2Q9NY99 539 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 MORC2Q9Y6X9 1032 aaPredicted RBP22.57■■□□□ 1.2
VTI1B-205ENST00000555543 NCOR1O75376 2440 aa22.57■■□□□ 1.2
VTI1B-205ENST00000555543 MYH11P35749 1972 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 ZMYM2Q9UBW7 1377 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 NRP1O14786 923 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 CLUL1Q15846 466 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 DUSP6Q16828 381 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 PTCRAQ6ISU1 281 aaPredicted RBP22.56■■□□□ 1.2
VTI1B-205ENST00000555543 TMEM161BQ8NDZ6 487 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 SPIRE2Q8WWL2 714 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 ADPGKQ9BRR6 497 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 TMEM175Q9BSA9 504 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 NTPCRQ9BSD7 190 aaKnown RBP22.56■■□□□ 1.2
VTI1B-205ENST00000555543 ZBP1Q9H171 429 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 NGRNQ9NPE2 291 aaKnown RBP22.56■■□□□ 1.2
VTI1B-205ENST00000555543 MARCH5Q9NX47 278 aa22.56■■□□□ 1.2
VTI1B-205ENST00000555543 PRG3Q9Y2Y8 225 aaPredicted RBP22.56■■□□□ 1.2
VTI1B-205ENST00000555543 TDRD15B5MCY1 1934 aaKnown RBP22.56■■□□□ 1.2
VTI1B-205ENST00000555543 C5orf42Q9H799 3197 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 F8W810 466 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 RECQL4O94761 1208 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 ZSCAN22P10073 491 aaPredicted RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 IL9P15248 144 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 NDUFV1P49821 464 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 DCAF4L1Q3SXM0 396 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 DDX53Q86TM3 631 aaKnown RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 VPS52Q8N1B4 723 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 LINC00301Q8NCQ3 95 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 AUTS2Q8WXX7 1259 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 LARP4BQ92615 738 aaKnown RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 ACO2Q99798 780 aaKnown RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 CLEC1BQ9P126 229 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 TFIP11Q9UBB9 837 aaKnown RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 BARX2Q9UMQ3 279 aaPredicted RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 TNFSF13BQ9Y275 285 aa22.55■■□□□ 1.2
VTI1B-205ENST00000555543 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
VTI1B-205ENST00000555543 CARNS1A5YM72 827 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 GRXCR2A6NFK2 248 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 C2orf71A6NGG8 1288 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 PTGESO14684 152 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 SMC1AQ14683 1233 aaKnown RBP22.54■■□□□ 1.2
VTI1B-205ENST00000555543 KRI1Q8N9T8 703 aaKnown RBP22.54■■□□□ 1.2
VTI1B-205ENST00000555543 TARS2Q9BW92 718 aaKnown RBP22.54■■□□□ 1.2
VTI1B-205ENST00000555543 CDT1Q9H211 546 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 PTPRHQ9HD43 1115 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 ODF2LQ9ULJ1 636 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 FAN1Q9Y2M0 1017 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 GDAQ9Y2T3 454 aa22.54■■□□□ 1.2
VTI1B-205ENST00000555543 ABLIM1O14639 778 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 F13A1P00488 732 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 ALDH2P05091 517 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 MAPTP10636 758 aaKnown RBP22.53■■□□□ 1.2
VTI1B-205ENST00000555543 OR1G1P47890 313 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 GRIK3Q13003 919 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 KCNC3Q14003 757 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 GIT2Q14161 759 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 STK38Q15208 465 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 CEP120Q8N960 986 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 MRPL43Q8N983 215 aaKnown RBP22.53■■□□□ 1.2
VTI1B-205ENST00000555543 MSLNLQ96KJ4 702 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 RPS6KC1Q96S38 1066 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 CDCA3Q99618 268 aaPredicted RBP22.53■■□□□ 1.2
VTI1B-205ENST00000555543 MRPL4Q9BYD3 311 aaKnown RBP22.53■■□□□ 1.2
VTI1B-205ENST00000555543 CACNG4Q9UBN1 327 aa22.53■■□□□ 1.2
VTI1B-205ENST00000555543 A0A087X0B3 334 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 CTSAP10619 480 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 PROZP22891 400 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 ZNF131P52739 623 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 SMTNP53814 917 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 NCKAP1LP55160 1127 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 FOXD4L6Q3SYB3 417 aaPredicted RBP22.52■■□□□ 1.2
VTI1B-205ENST00000555543 ZNF568Q3ZCX4 644 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 FOXD4L3Q6VB84 417 aaPredicted RBP22.52■■□□□ 1.2
VTI1B-205ENST00000555543 RABGGTAQ92696 567 aa22.52■■□□□ 1.2
VTI1B-205ENST00000555543 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms