RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NDUFA10O95299 355 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 SEC24CP53992 1094 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 RNASE9P60153 205 aaKnown RBP5.41□□□□□ -1.54
SNX6-204ENST00000555541 NHLH2Q02577 135 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 DUSP2Q05923 314 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 BMS1Q14692 1282 aaKnown RBP5.41□□□□□ -1.54
SNX6-204ENST00000555541 PCBP1Q15365 356 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNX6-204ENST00000555541 PDCD4Q53EL6 469 aaKnown RBP5.41□□□□□ -1.54
SNX6-204ENST00000555541 ABHD15Q6UXT9 468 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 SMC1BQ8NDV3 1235 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 FAM193BQ96PV7 902 aaPredicted RBP5.41□□□□□ -1.54
SNX6-204ENST00000555541 NEU1Q99519 415 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 KPNA6O60684 536 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 TMEM127O75204 238 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 PTH2RP49190 550 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
SNX6-204ENST00000555541 APBA1Q02410 837 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 MGAT5Q09328 741 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 FOXF2Q12947 444 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 TRIM25Q14258 630 aaKnown RBP5.4□□□□□ -1.54
SNX6-204ENST00000555541 TERF2Q15554 542 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 NFE2L2Q16236 605 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 FAM102AQ5T9C2 384 aaPredicted RBP5.4□□□□□ -1.54
SNX6-204ENST00000555541 C9orf106Q8NAJ2 232 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 EPC1Q9H2F5 836 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 PRSS50Q9UI38 385 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 PPP2R3BQ9Y5P8 575 aa5.4□□□□□ -1.54
SNX6-204ENST00000555541 TBKBP1A7MCY6 615 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 DIRC3C9JPN6 131 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 GAS7O60861 476 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 EGR2P11161 476 aaPredicted RBP5.39□□□□□ -1.55
SNX6-204ENST00000555541 USP14P54578 494 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 MANFP55145 182 aaKnown RBP5.39□□□□□ -1.55
SNX6-204ENST00000555541 SCAPQ12770 1279 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
SNX6-204ENST00000555541 C21orf62-AS1Q17RA5 79 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 CPEB3Q8NE35 698 aaKnown RBP5.39□□□□□ -1.55
SNX6-204ENST00000555541 SPTLC3Q9NUV7 552 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 HDAC5Q9UQL6 1122 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 SPATA31A6Q5VVP1 1343 aa5.39□□□□□ -1.55
SNX6-204ENST00000555541 PRR5-ARHGAP8B1AHC4 643 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
SNX6-204ENST00000555541 HSP90B1P14625 803 aaKnown RBP5.38□□□□□ -1.55
SNX6-204ENST00000555541 TP53BP2Q13625 1128 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 BMT2Q1RMZ1 405 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 LRRTM3Q86VH5 581 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 CMTR2Q8IYT2 770 aaKnown RBP5.38□□□□□ -1.55
SNX6-204ENST00000555541 SIMC1Q8NDZ2 872 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 OR10H5Q8NGA6 315 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 ASB10Q8WXI3 467 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 FERMT2Q96AC1 680 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 LRFN3Q9BTN0 628 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 SPON1Q9HCB6 807 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 CLCA2Q9UQC9 943 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 CD2APQ9Y5K6 639 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 SALL3Q9BXA9 1300 aa5.38□□□□□ -1.55
SNX6-204ENST00000555541 UNC119BA6NIH7 251 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 WNT10BO00744 389 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 NRP2O60462 931 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 SPDEFO95238 335 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 CLEC2LP0C7M8 214 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 MPLP40238 635 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 KPNA1P52294 538 aaPredicted RBP5.37□□□□□ -1.55
SNX6-204ENST00000555541 TKFCQ3LXA3 575 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 MFSD14BQ5SR56 506 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 SYNPOQ8N3V7 929 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 SUPT20HQ8NEM7 779 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 SNX33Q8WV41 574 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 SREK1Q8WXA9 508 aaKnown RBP5.37□□□□□ -1.55
SNX6-204ENST00000555541 RNPC3Q96LT9 517 aaKnown RBP5.37□□□□□ -1.55
SNX6-204ENST00000555541 ANO3Q9BYT9 981 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 INSL6Q9Y581 213 aa5.37□□□□□ -1.55
SNX6-204ENST00000555541 ST20-MTHFSA0A0A6YYL1 179 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 ELANEP08246 267 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 LSP1P33241 339 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 NEK4P51957 841 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 LMBR1LQ6UX01 489 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 LCORLQ8N3X6 602 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 RSAD2Q8WXG1 361 aa5.36□□□□□ -1.55
SNX6-204ENST00000555541 GPR101Q96P66 508 aaPredicted RBP5.36□□□□□ -1.55
SNX6-204ENST00000555541 TESQ9UGI8 421 aaKnown RBP5.36□□□□□ -1.55
SNX6-204ENST00000555541 B5MCH6 92 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 ITGA10O75578 1167 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 HKR1P10072 659 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 RBP3P10745 1247 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 XPAP23025 273 aaPredicted RBP5.35□□□□□ -1.55
SNX6-204ENST00000555541 CTSSP25774 331 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 PLA2G5P39877 138 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 ADCYAP1R1P41586 468 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 NRG3P56975 720 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 GUCY1B3Q02153 619 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 PPARAQ07869 468 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms