RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
APEX1-209ENST00000555306 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
APEX1-209ENST00000555306 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
APEX1-209ENST00000555306 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
APEX1-209ENST00000555306 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
APEX1-209ENST00000555306 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 KCNJ18B7U540 433 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 CSDE1O75534 798 aaKnown RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 AKAP3O75969 853 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 ADRB2P07550 413 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 CYP2J2P51589 502 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 PAK2Q13177 524 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 KCNJ12Q14500 433 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 DSC3Q14574 896 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 USP37Q86T82 979 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 TRIM59Q8IWR1 403 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 APBB2Q92870 758 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 ZBTB45Q96K62 511 aaPredicted RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 CDT1Q9H211 546 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.32
APEX1-209ENST00000555306 CITO14578 2027 aa13.08□□□□□ -0.32
APEX1-209ENST00000555306 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 TISP43B9A030 160 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 ZNF623O75123 536 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 CLTAP09496 248 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 SKIP12755 728 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 GRM5P41594 1212 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 CASP4P49662 377 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 RAB27AP51159 221 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 SURF1Q15526 300 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 ZNF568Q3ZCX4 644 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 CNOT6LQ96LI5 555 aaKnown RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
APEX1-209ENST00000555306 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
APEX1-209ENST00000555306 PMM2O15305 246 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 TIMP1P01033 207 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 GHRP10912 638 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 FGFR4P22455 802 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 CD52P31358 61 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
APEX1-209ENST00000555306 CLDN10P78369 228 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 GPNMBQ14956 572 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 UBXN11Q5T124 520 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 MRPL10Q7Z7H8 261 aaKnown RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 BRSK2Q8IWQ3 736 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 CD302Q8IX05 232 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 TUBGCP2Q9BSJ2 902 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 IFIH1Q9BYX4 1025 aaKnown RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 PLEKHA5Q9HAU0 1116 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 ANKFY1Q9P2R3 1169 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 USP20Q9Y2K6 914 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
APEX1-209ENST00000555306 ANK1P16157 1881 aa13.06□□□□□ -0.32
APEX1-209ENST00000555306 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 STX10O60499 249 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 NBNO60934 754 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 IL18RAPO95256 599 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 TPM2P07951 284 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 PFKMP08237 780 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 KRT13P13646 458 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 GTF2H1P32780 548 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 MTIF2P46199 727 aaKnown RBP13.05□□□□□ -0.32
APEX1-209ENST00000555306 FAM189BP81408 668 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 FANCCQ00597 558 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
APEX1-209ENST00000555306 BFSP1Q12934 665 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms