RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 C7orf25Q9BPX7 421 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 ADPGKQ9BRR6 497 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 MRPL9Q9BYD2 267 aaKnown RBP15.6■□□□□ 0.09
SHMT2-217ENST00000555116 CDT1Q9H211 546 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 UBN1Q9NPG3 1134 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 PANK4Q9NVE7 773 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 SERTAD1Q9UHV2 236 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 TBX20Q9UMR3 447 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 INPP5FQ9Y2H2 1132 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 GIT1Q9Y2X7 761 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 ZMYM2Q9UBW7 1377 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 SLFN14P0C7P3 912 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 IDEP14735 1019 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 AKAP5P24588 427 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 NDUFA8P51970 172 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 AMPD3Q01432 767 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 ZPBP2Q6X784 338 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 ZNF720Q7Z2F6 126 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 HACE1Q8IYU2 909 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 FSIP1Q8NA03 581 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 SLC17A8Q8NDX2 589 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 P2RX5Q93086 422 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 ZBTB45Q96K62 511 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 GAD1Q99259 594 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 STRA6Q9BX79 667 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 GOLPH3LQ9H4A5 285 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 MTCH2Q9Y6C9 303 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 B4GALT3O60512 393 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 PPP1R37O75864 691 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 LAG3P18627 525 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 IGFBP4P22692 258 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 ZC2HC1CQ53FD0 456 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 KLHL23Q8NBE8 558 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 URGCPQ8TCY9 931 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 MRPS27Q92552 414 aaKnown RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 C11orf84Q9BUA3 381 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-217ENST00000555116 NRDE2Q9H7Z3 1164 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 AAASQ9NRG9 546 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 OLFML3Q9NRN5 406 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 MIOSQ9NXC5 875 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
SHMT2-217ENST00000555116 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 GRM6O15303 877 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 TOM1L1O75674 476 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 PIGRP01833 764 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 ITGB1P05556 798 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 CASP1P29466 404 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 MLH1P40692 756 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 SYKP43405 635 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 COASYQ13057 564 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 SKOR2Q2VWA4 1001 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-217ENST00000555116 ZNF568Q3ZCX4 644 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 HERC4Q5GLZ8 1057 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-217ENST00000555116 KCNT2Q6UVM3 1135 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 GRAMD1CQ8IYS0 662 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 CEP57L1Q8IYX8 460 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 GSTCDQ8NEC7 633 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 ZFP42Q96MM3 310 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 LMCD1Q9NZU5 365 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 TBC1D7Q9P0N9 293 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 PLAGL2Q9UPG8 496 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 PCDHB12Q9Y5F1 795 aa15.58■□□□□ 0.08
SHMT2-217ENST00000555116 RECQL4O94761 1208 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 MCF2P10911 925 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 ABCD1P33897 745 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 AFMP43652 599 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 ASIC1P78348 528 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 APBB1IPQ7Z5R6 666 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-217ENST00000555116 ZBTB33Q86T24 672 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 ZNF280BQ86YH2 543 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 CEP120Q8N960 986 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 ZNF558Q96NG5 402 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 HAPLN2Q9GZV7 340 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 BLZF1Q9H2G9 400 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 MRPL44Q9H9J2 332 aaKnown RBP15.57■□□□□ 0.08
SHMT2-217ENST00000555116 KLK14Q9P0G3 267 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 PARP2Q9UGN5 583 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 DDHD2O94830 711 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 POMCP01189 267 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 PBX3P40426 434 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 GRM5P41594 1212 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 SCNN1GP51170 649 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 CASP5P51878 434 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 BCAR1P56945 870 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 CUL4BQ13620 913 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 CSPP1Q1MSJ5 1256 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
SHMT2-217ENST00000555116 SPPL3Q8TCT6 385 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms