RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
ACTN1-214ENST00000555075 PCDHB12Q9Y5F1 795 aa13.2□□□□□ -0.3
ACTN1-214ENST00000555075 SIP14410 1827 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 RBAK-RBAKDNI3L0D1 243 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 CTNNB1P35222 781 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 HTRA4P83105 476 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-214ENST00000555075 GTF2BQ00403 316 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 PSMD2Q13200 908 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-214ENST00000555075 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 UBXN11Q5T124 520 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 HS2ST1Q7LGA3 356 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-214ENST00000555075 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 SMARCE1Q969G3 411 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-214ENST00000555075 NXF3Q9H4D5 531 aaKnown RBP13.19□□□□□ -0.3
ACTN1-214ENST00000555075 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 GIT1Q9Y2X7 761 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 HES2Q9Y543 173 aa13.19□□□□□ -0.3
ACTN1-214ENST00000555075 FRMD3A2A2Y4 597 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
ACTN1-214ENST00000555075 MYBP10242 640 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 LAG3P18627 525 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 AKAP5P24588 427 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 MLH1P40692 756 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 GATMP50440 423 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 MRPL10Q7Z7H8 261 aaKnown RBP13.18□□□□□ -0.3
ACTN1-214ENST00000555075 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 MYLIPQ8WY64 445 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-214ENST00000555075 CDX2Q99626 313 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-214ENST00000555075 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
ACTN1-214ENST00000555075 CDT1Q9H211 546 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
ACTN1-214ENST00000555075 UBE4BO95155 1302 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 LCHNA4D1U4 455 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 PNOCQ13519 176 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 STIM1Q13586 685 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 ARMCX5Q6P1M9 558 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 ZNF598Q86UK7 904 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 ZNF558Q96NG5 402 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 GAD1Q99259 594 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 TYW1Q9NV66 732 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
ACTN1-214ENST00000555075 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
ACTN1-214ENST00000555075 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 LPXNO60711 386 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 OFD1O75665 1012 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 RECQL4O94761 1208 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 POMCP01189 267 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 IGFBP4P22692 258 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 CA8P35219 290 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 GRM5P41594 1212 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 TAP1Q03518 808 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 KRT17Q04695 432 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 TMEM192Q8IY95 271 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 GOLGA5Q8TBA6 731 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 ZBTB45Q96K62 511 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
ACTN1-214ENST00000555075 RPF1Q9H9Y2 349 aaKnown RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
ACTN1-214ENST00000555075 EYSQ5T1H1 3165 aa13.15□□□□□ -0.3
ACTN1-214ENST00000555075 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
ACTN1-214ENST00000555075 OGTO15294 1046 aa13.15□□□□□ -0.3
ACTN1-214ENST00000555075 PIGRP01833 764 aa13.15□□□□□ -0.3
ACTN1-214ENST00000555075 ALDH2P05091 517 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms