RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SEMA3EO15041 775 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 MMEP08473 750 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 JAK3P52333 1124 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ADCY2Q08462 1091 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 RARS2Q5T160 578 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SH3TC2Q8TF17 1288 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF496Q96IT1 587 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 RERGLQ9H628 205 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PKD2L2Q9NZM6 624 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 C2CD2LO14523 706 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SULT1E1P49888 294 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 BTKQ06187 659 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TRIM25Q14258 630 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 E2F4Q16254 413 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 NAALADL2Q58DX5 795 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 HEATR6Q6AI08 1181 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ARHGEF25Q86VW2 580 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TMA16Q96EY4 203 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 GALNT8Q9NY28 637 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 LSM7Q9UK45 103 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ATP5JP18859 108 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC15Q0P6D6 951 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 FAM167AQ96KS9 214 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SATB2Q9UPW6 733 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PNMA6FA0A0J9YX94 578 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 FKBP9O95302 570 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 GH2P01242 217 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CHGBP05060 677 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 NUGGCQ68CJ6 796 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF746Q6NUN9 644 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 FKBP9P1Q75LS8 142 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 OR6J1Q8NGC5 347 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 SPATA16Q9BXB7 569 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 BLMP54132 1417 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 IPO5O00410 1097 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 LAD1O00515 517 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 KCNA6P17658 529 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 PDAP1Q13442 181 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 SLC44A4Q53GD3 710 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ANO5Q75V66 913 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 GCOM2Q9BZD3 368 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 KLHL31Q9H511 634 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 N6AMT1Q9Y5N5 214 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 DNMBPQ6XZF7 1577 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 PALMO75781 387 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ERVK-10P10266 1014 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ATP6V1C1P21283 382 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MAPK6Q16659 721 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 IL31Q6EBC2 164 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 GREM2Q9H772 168 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MAN1B1Q9UKM7 699 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 COQ6Q9Y2Z9 468 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MYO18AQ92614 2054 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ATP9BO43861 1147 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 GCLMP48507 274 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 FBXW10Q5XX13 1052 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HIBCHQ6NVY1 386 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 NLGN1Q8N2Q7 840 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 C11orf70Q9BRQ4 267 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 BBS2Q9BXC9 721 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 RAVER2Q9HCJ3 691 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 SNX24Q9Y343 169 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CARMIL3Q8ND23 1372 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CLDN3O15551 220 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 NDUFS3O75489 264 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 DGKIO75912 1065 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 FOSL2P15408 326 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CDC25AP30304 524 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 RUNX1T1Q06455 604 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CUL4AQ13619 759 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CNGA3Q16281 694 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ICE2Q659A1 982 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 POMGNT2Q8NAT1 580 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 SAAL1Q96ER3 474 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 PNKPQ96T60 521 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MPP6Q9NZW5 540 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 A0A1W2PP64 1363 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 KIF28PB7ZC32 967 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HIST1H2AGP0C0S8 130 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HIST1H2ADP20671 130 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HIST1H2AHQ96KK5 128 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 TGS1Q96RS0 853 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HIST1H2AJQ99878 128 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 H2AFJQ9BTM1 129 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ARHGEF38Q9NXL2 777 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CNOT8Q9UFF9 292 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MAP3K1Q13233 1512 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HEATR9A2RTY3 570 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 TADA2AO75478 443 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ATP12AP54707 1039 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 MTMR1Q13613 665 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 WDR75Q8IWA0 830 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 EMILIN3Q9NT22 766 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 RPS6KB2Q9UBS0 482 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 FAM47DPA6NHR8 397 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms