RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 OGTO15294 1046 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 B4GALT5O43286 388 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 PQBP1O60828 265 aaKnown RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 CHRNA1P02708 482 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 EDN1P05305 212 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 IQCF3P0C7M6 154 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 CKBP12277 381 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 ARF4P18085 180 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 COPB1P53618 953 aaKnown RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 POU5F1Q01860 360 aaKnown RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 MRFAP1L1Q96HT8 127 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 TAB2Q9NYJ8 693 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 IFNKQ9P0W0 207 aa15.66■□□□□ 0.1
SHOX2-206ENST00000554685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHOX2-206ENST00000554685 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 STX10O60499 249 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
SHOX2-206ENST00000554685 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
SHOX2-206ENST00000554685 SELPP16109 830 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 CASP4P49662 377 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 SNRNP35Q16560 246 aaKnown RBP15.65■□□□□ 0.1
SHOX2-206ENST00000554685 FKBP15Q5T1M5 1219 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 ZNF618Q5T7W0 954 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 SLC27A1Q6PCB7 646 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
SHOX2-206ENST00000554685 TMEM40Q8WWA1 233 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 PAWRQ96IZ0 340 aaKnown RBP15.65■□□□□ 0.1
SHOX2-206ENST00000554685 FAM213AQ9BRX8 229 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 CDT1Q9H211 546 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 CHST12Q9NRB3 414 aa15.65■□□□□ 0.1
SHOX2-206ENST00000554685 LGALS16A8MUM7 142 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 PES1O00541 588 aaKnown RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ABLIM1O14639 778 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ADCY5O95622 1261 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 HARSP12081 509 aaKnown RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 FGFR4P22455 802 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ZNF75DP51815 510 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 BFSP1Q12934 665 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 PAK2Q13177 524 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 SURF1Q15526 300 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 TRIM60Q495X7 471 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 VWA3BQ502W6 1294 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 FBXO47Q5MNV8 452 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 LRRC8DQ7L1W4 858 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ZBTB33Q86T24 672 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 FAM228AQ86W67 206 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 TMC2Q8TDI7 906 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 SAAL1Q96ER3 474 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 CPB2Q96IY4 423 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 ZBTB45Q96K62 511 aaPredicted RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 TRIM6Q9C030 488 aaPredicted RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 XPO4Q9C0E2 1151 aaKnown RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 VPS16Q9H269 839 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 PIN4Q9Y237 131 aaKnown RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 USP20Q9Y2K6 914 aa15.64■□□□□ 0.09
SHOX2-206ENST00000554685 NOC2LQ9Y3T9 749 aaKnown RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 TRIP12Q14669 1992 aaPredicted RBP15.64■□□□□ 0.09
SHOX2-206ENST00000554685 GOLGA8IPA6NC78 632 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 GOLGA8JA6NMD2 632 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 TTLL13PA6NNM8 815 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 N4BP1O75113 896 aaKnown RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 ZSCAN20P17040 1043 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 CDC25BP30305 580 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 VAMP7P51809 220 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 TLE2Q04725 743 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 CYP24A1Q07973 514 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 DCAF17Q5H9S7 520 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 TCERG1LQ5VWI1 586 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 EEF1DP3Q658K8 133 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 APTXQ7Z2E3 356 aaKnown RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 HACE1Q8IYU2 909 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 RDH13Q8NBN7 331 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 MFSD14AQ96MC6 490 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 NDST4Q9H3R1 872 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 RBAKQ9NYW8 714 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-206ENST00000554685 ST3GAL5Q9UNP4 418 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 ATP11BQ9Y2G3 1177 aa15.63■□□□□ 0.09
SHOX2-206ENST00000554685 AP5Z1O43299 807 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 AFPP02771 609 aaKnown RBP15.62■□□□□ 0.09
SHOX2-206ENST00000554685 CLTAP09496 248 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 GHRP10912 638 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 HOXA11P31270 313 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-206ENST00000554685 GRM5P41594 1212 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 MCCD1P59942 119 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-206ENST00000554685 NFX1Q12986 1120 aaKnown RBP15.62■□□□□ 0.09
SHOX2-206ENST00000554685 LPIN1Q14693 890 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 PSMD6Q15008 389 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 CBWD2Q8IUF1 395 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 BRSK2Q8IWQ3 736 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 FNBP1Q96RU3 617 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms