RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 GPR149Q86SP6 731 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 KLHL5Q96PQ7 755 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 AGPAT5Q9NUQ2 364 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 A0A1W2PQ27 194 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 A0A1W2PQ64 194 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 A0A1W2PQD8 194 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 PROB1E7EW31 1015 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 SRGAP2CP0DJJ0 459 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 TXKP42681 527 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 CLCN4P51793 760 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 AFF1P51825 1210 aaKnown RBP15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 DTHD1Q6ZMT9 781 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 AGMOQ6ZNB7 445 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 USP49Q70CQ1 688 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 OTOP3Q7RTS5 596 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 IGSF22Q8N9C0 903 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 SLC7A3Q8WY07 619 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 FAM193BQ96PV7 902 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 RSAD1Q9HA92 442 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 IFT122Q9HBG6 1241 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 BMP2KQ9NSY1 1161 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.08
SPTLC2-202ENST00000554365 PLXNA3P51805 1871 aa15.52■□□□□ 0.07
SPTLC2-202ENST00000554365 ZFHX2Q9C0A1 2572 aaPredicted RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 EML1O00423 815 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 C2CD2LO14523 706 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 NRP1O14786 923 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 POMCP01189 267 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 ALDH2P05091 517 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 CNPP09543 421 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 QARSP47897 775 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 CLCN5P51795 746 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 UBE2HP62256 183 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 SPECC1Q5M775 1068 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 RESP18Q5W5W9 173 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 PSPC1Q8WXF1 523 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 CEP170P1Q96L14 293 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 GOLPH3LQ9H4A5 285 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 MRPL17Q9NRX2 175 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 STK39Q9UEW8 545 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 MYO15AQ9UKN7 3530 aa15.51■□□□□ 0.07
SPTLC2-202ENST00000554365 MYO10Q9HD67 2058 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 FAM237AA0A1B0GTK4 181 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 PRR23AA6NEV1 266 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 POTEMA6NI47 508 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 PP2D1A8MPX8 630 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 GOLGA6L22H0YM25 854 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 DKC1O60832 514 aaKnown RBP eCLIP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 CMA1P23946 247 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 LONP1P36776 959 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 NBL1P41271 181 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 LAMTOR4Q0VGL1 99 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 PPP2R5CQ13362 524 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 TDGQ13569 410 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 SRGAP1Q7Z6B7 1085 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 MRPL10Q7Z7H8 261 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 TMEM175Q9BSA9 504 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 MMTAG2Q9BU76 263 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 MINDY3Q9H8M7 445 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 KANSL3Q9P2N6 904 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 WRAP73Q9P2S5 460 aaPredicted RBP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 FBXL21Q9UKT6 434 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 PCDHA12Q9UN75 941 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 HPSEQ9Y251 543 aa15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 PRG3Q9Y2Y8 225 aaPredicted RBP15.5■□□□□ 0.07
SPTLC2-202ENST00000554365 CNTNAP2Q9UHC6 1331 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 DENND4AQ7Z401 1863 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 URODP06132 367 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 MYBP10242 640 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 CDC25AP30304 524 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 HOXA11P31270 313 aaPredicted RBP15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 OR1G1P47890 313 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 PDIA5Q14554 519 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 EXOC8Q8IYI6 725 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 GPT2Q8TD30 523 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 EPSTI1Q96J88 318 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 DHX33Q9H6R0 707 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 MAN1C1Q9NR34 630 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 CACNA1HO95180 2353 aa15.49■□□□□ 0.07
SPTLC2-202ENST00000554365 A0A087X0B3 334 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 PI15O43692 258 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 MARCH6O60337 910 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 LILRB3O75022 631 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 ERLIN2O94905 339 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 SOD2P04179 222 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 P4HBP07237 508 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 ITGA4P13612 1032 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 LIG1P18858 919 aa15.48■□□□□ 0.07
SPTLC2-202ENST00000554365 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms