RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ANKRD62A6NC57 917 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ATP2A1O14983 1001 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 EXOC3O60645 756 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PRPF6O94906 941 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CD2BP2O95400 341 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 DCNP07585 359 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM191BP0C7N4 346 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 IRF1P10914 325 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 COL6A1P12109 1028 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CD58P19256 250 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PDCP20941 246 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ACAT1P24752 427 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 BMPR1AP36894 532 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 HSD17B4P51659 736 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 KPNA1P52294 538 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ERVFC1P60507 584 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 BFSP1Q12934 665 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SEMA3FQ13275 785 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MBTPS1Q14703 1052 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC6Q16204 474 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZC2HC1CQ53FD0 456 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CC2D1AQ6P1N0 951 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TSHZ1Q6ZSZ6 1077 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 GRASPQ7Z6J2 395 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ADGRD2Q7Z7M1 963 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SLFN12Q8IYM2 578 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 NSUN7Q8NE18 718 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RSAD2Q8WXG1 361 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RSPH1Q8WYR4 309 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 DHX38Q92620 1227 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ANKS1AQ92625 1134 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SYMPKQ92797 1274 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PGBD4Q96DM1 585 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZSCAN31Q96LW9 406 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM213AQ9BRX8 229 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MSTO1Q9BUK6 570 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 IKZF4Q9H2S9 585 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SUDS3Q9H7L9 328 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SLC39A2Q9NP94 309 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 NUDT5Q9UKK9 219 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ADAMTS5Q9UNA0 930 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 OTOGLQ3ZCN5 2332 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SPTBN1Q01082 2364 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM208BQ5VWN6 2430 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 DICER1Q9UPY3 1922 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ASCC3Q8N3C0 2202 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 LAMB2P55268 1798 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 BCORQ6W2J9 1755 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC195A0A1B0GUA6 201 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TISP43B9A030 160 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 POLR2DO15514 142 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZBTB24O43167 697 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 WIPF1O43516 503 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MGEA5O60502 916 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 HIP1RO75146 1068 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RECQL4O94761 1208 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CKMP06732 381 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 THP07101 528 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SNHG28P0DPA3 235 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TCF3P15923 654 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PLCG1P19174 1290 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 U2AF2P26368 475 aaKnown RBP eCLIP2.74□□□□□ -1.976e-7■■■■□ 20.8
PRPF39-205ENST00000554081 SFNP31947 248 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SREBF1P36956 1147 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 WASP42768 502 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 INSM1Q01101 510 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 EXOSC10Q01780 885 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 DNM1Q05193 864 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 GRM2Q14416 872 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PKN1Q16512 942 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 LRIT3Q3SXY7 679 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CTXN3Q4LDR2 81 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF484Q5JVG2 852 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM31Q5JXX7 168 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PPM1LQ5SGD2 360 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CYP4A22Q5TCH4 519 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 EEF1DP3Q658K8 133 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 NOTUMQ6P988 496 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 LRSAM1Q6UWE0 723 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC73Q6ZRK6 1079 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 USP49Q70CQ1 688 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RSRC2Q7L4I2 434 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ANKRD33Q7Z3H0 272 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RPAINQ86UA6 219 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SERINC5Q86VE9 423 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SGMS1Q86VZ5 419 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM228AQ86W67 206 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ELMOD1Q8N336 334 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 DEFB119Q8N690 84 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 OR6B3Q8NGW1 331 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SLC7A14Q8TBB6 771 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF274Q96GC6 653 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC34Q96HJ3 373 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF512Q96ME7 567 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PNMA5Q96PV4 448 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PAAF1Q9BRP4 392 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PYM1Q9BRP8 204 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 GTPBP4Q9BZE4 634 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZMYND12Q9H0C1 365 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms