RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ITGA10O75578 1167 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 SREBF1P36956 1147 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 RAC3P60763 192 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 DUSP2Q05923 314 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 LCNL1Q6ZST4 164 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 ADGRE4PQ86SQ3 457 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 RHOT1Q8IXI2 618 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 GRAMD1CQ8IYS0 662 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 OR7D4Q8NG98 312 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 FEZF2Q8TBJ5 459 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 DIS3LQ8TF46 1054 aaKnown RBP6.68□□□□□ -1.34
FOXN3-206ENST00000554005 NEIL1Q96FI4 390 aaPredicted RBP6.68□□□□□ -1.34
FOXN3-206ENST00000554005 CCDC136Q96JN2 1154 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 DPYSL5Q9BPU6 564 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 PDCD2LQ9BRP1 358 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 GEMIN8Q9NWZ8 242 aaKnown RBP6.68□□□□□ -1.34
FOXN3-206ENST00000554005 DUSP10Q9Y6W6 482 aa6.68□□□□□ -1.34
FOXN3-206ENST00000554005 PMS2P1A4D2B8 440 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 NRP1O14786 923 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 ERC2O15083 957 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 GASTP01350 101 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 GYPEP15421 78 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 BMP7P18075 431 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 CRHR1P34998 444 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 EPHB4P54760 987 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 PPP2CBP62714 309 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 PPP2CAP67775 309 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 PGS1Q32NB8 556 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 PQLC1Q8N2U9 271 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 ENKD1Q9H0I2 346 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 SEC61A2Q9H9S3 476 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 IL23AQ9NPF7 189 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 OBP2AQ9NY56 170 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 OAZ3Q9UMX2 235 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 PCDHB1Q9Y5F3 818 aa6.67□□□□□ -1.34
FOXN3-206ENST00000554005 CFAP20Q9Y6A4 193 aaKnown RBP6.67□□□□□ -1.34
FOXN3-206ENST00000554005 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 DNMBPQ6XZF7 1577 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 SGTAO43765 313 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 CASRP41180 1078 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 PER3P56645 1201 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 TBX4P57082 545 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 DSC2Q02487 901 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 RIN1Q13671 783 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 CMTM4Q8IZR5 234 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 NSUN6Q8TEA1 469 aaKnown RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 RAB24Q969Q5 203 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 LMF1Q96S06 567 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 MEGF9Q9H1U4 602 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 C12orf65Q9H3J6 166 aaKnown RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 LDAHQ9H6V9 325 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 MANSC1Q9H8J5 431 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 AGO3Q9H9G7 860 aaKnown RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 NCDNQ9UBB6 729 aa6.66□□□□□ -1.34
FOXN3-206ENST00000554005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.66□□□□□ -1.34
FOXN3-206ENST00000554005 WNT10BO00744 389 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 LAMTOR5O43504 91 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 PRC1O43663 620 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 SASH1O94885 1247 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 CNR2P34972 360 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 GNALP38405 381 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 CDC42EP1Q00587 391 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 TARDBPQ13148 414 aaKnown RBP eCLIP6.65□□□□□ -1.34
FOXN3-206ENST00000554005 SURF1Q15526 300 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 PPP4R3AQ6IN85 833 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 DGKHQ86XP1 1220 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 GPR135Q8IZ08 494 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 ZBTB34Q8NCN2 500 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 REPS2Q8NFH8 660 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 FBXO18Q8NFZ0 1043 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 C1GALT1C1Q96EU7 318 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 ACO2Q99798 780 aaKnown RBP6.65□□□□□ -1.34
FOXN3-206ENST00000554005 PTPN18Q99952 460 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 LANCL2Q9NS86 450 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 TDP1Q9NUW8 608 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 DDX20Q9UHI6 824 aaKnown RBP6.65□□□□□ -1.34
FOXN3-206ENST00000554005 RCAN3Q9UKA8 241 aa6.65□□□□□ -1.34
FOXN3-206ENST00000554005 ABCC8Q09428 1581 aa6.65□□□□□ -1.35
FOXN3-206ENST00000554005 UBE2QL1A1L167 161 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
FOXN3-206ENST00000554005 CDC14BO60729 498 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 AMY1AP04745 511 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 MYBP10242 640 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 CR2P20023 1033 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 GUCY1A2P33402 732 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 DUSP8Q13202 625 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 GBX1Q14549 363 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 GRM3Q14832 879 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 PRAMEF14Q5SWL7 426 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
FOXN3-206ENST00000554005 ZGPATQ8N5A5 531 aaKnown RBP6.64□□□□□ -1.35
FOXN3-206ENST00000554005 OR5M3Q8NGP4 307 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms