RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 INPPL1O15357 1258 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 ASAP2O43150 1006 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
TDP1-208ENST00000553989 NCLP19338 710 aaKnown RBP9.82□□□□□ -0.84
TDP1-208ENST00000553989 GLUD2P49448 558 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 CLCN6P51797 869 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 TFDP1Q14186 410 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 EPHA7Q15375 998 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 NPY5RQ15761 445 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 UBXN11Q5T124 520 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 PPP4R3AQ6IN85 833 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 C15orf39Q6ZRI6 1047 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 MRPL10Q7Z7H8 261 aaKnown RBP9.82□□□□□ -0.84
TDP1-208ENST00000553989 TPH2Q8IWU9 490 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 C4orf19Q8IY42 314 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 SIX5Q8N196 739 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 NKD2Q969F2 451 aaPredicted RBP9.82□□□□□ -0.84
TDP1-208ENST00000553989 DYDC2Q96IM9 177 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 CPB2Q96IY4 423 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 RPS6KC1Q96S38 1066 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 GAD1Q99259 594 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 PHF20Q9BVI0 1012 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 EIF2AQ9BY44 585 aaKnown RBP9.82□□□□□ -0.84
TDP1-208ENST00000553989 ZSWIM4Q9H7M6 989 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 KCNK12Q9HB15 430 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 PIDD1Q9HB75 910 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 BRMS1Q9HCU9 246 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 KCNMB3Q9NPA1 279 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 RGL1Q9NZL6 768 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 WRAP73Q9P2S5 460 aaPredicted RBP9.82□□□□□ -0.84
TDP1-208ENST00000553989 DUSP12Q9UNI6 340 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 IPPQ9Y573 584 aa9.82□□□□□ -0.84
TDP1-208ENST00000553989 CCDC195A0A1B0GUA6 201 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 PRR23AA6NEV1 266 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 ARL5CA6NH57 179 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 TBX3O15119 743 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 TEX28O15482 410 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 TSPAN1O60635 241 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 CFHP08603 1231 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 AXLP30530 894 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 HOXA11P31270 313 aaPredicted RBP9.81□□□□□ -0.84
TDP1-208ENST00000553989 NBL1P41271 181 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 SCNN1GP51170 649 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 CLCN5P51795 746 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 ANAPC15P60006 121 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 SCRN1Q12765 414 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 MXD4Q14582 209 aaPredicted RBP9.81□□□□□ -0.84
TDP1-208ENST00000553989 PCBP1Q15365 356 aaKnown RBP eCLIP9.81□□□□□ -0.84
TDP1-208ENST00000553989 CWF19L1Q69YN2 538 aaKnown RBP9.81□□□□□ -0.84
TDP1-208ENST00000553989 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 FRMD5Q7Z6J6 570 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 GLYCTKQ8IVS8 523 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 COLGALT2Q8IYK4 626 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 SLFN12Q8IYM2 578 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 SMG8Q8ND04 991 aaKnown RBP9.81□□□□□ -0.84
TDP1-208ENST00000553989 SMG7Q92540 1137 aaKnown RBP9.81□□□□□ -0.84
TDP1-208ENST00000553989 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 COLEC11Q9BWP8 271 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 MARCH5Q9NX47 278 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 IGSF9Q9P2J2 1179 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 HES2Q9Y543 173 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 MYO10Q9HD67 2058 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 CLUHO75153 1309 aa9.81□□□□□ -0.84
TDP1-208ENST00000553989 PROB1E7EW31 1015 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 NARSO43776 548 aaKnown RBP9.8□□□□□ -0.84
TDP1-208ENST00000553989 DTNBO60941 627 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 SPATA31D3P0C874 917 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 AOC1P19801 751 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 KRT2P35908 639 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 PTENP60484 403 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 SPATA31D4Q6ZUB0 917 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 GET4Q7L5D6 327 aaPredicted RBP9.8□□□□□ -0.84
TDP1-208ENST00000553989 TAS1R1Q7RTX1 841 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 PALB2Q86YC2 1186 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 PDCD7Q8N8D1 485 aaKnown RBP9.8□□□□□ -0.84
TDP1-208ENST00000553989 OXER1Q8TDS5 423 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 WASF1Q92558 559 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 ANP32BQ92688 251 aaKnown RBP9.8□□□□□ -0.84
TDP1-208ENST00000553989 HAS1Q92839 578 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 ZFP42Q96MM3 310 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 TM6SF1Q9BZW5 370 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 CSRNP2Q9H175 543 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 NXF3Q9H4D5 531 aaKnown RBP9.8□□□□□ -0.84
TDP1-208ENST00000553989 GJB4Q9NTQ9 266 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 PARP2Q9UGN5 583 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 DENND4AQ7Z401 1863 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 STK36Q9NRP7 1315 aa9.8□□□□□ -0.84
TDP1-208ENST00000553989 F8W810 466 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 ZBTB39O15060 712 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 PI15O43692 258 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 USO1O60763 962 aaKnown RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 LILRB3O75022 631 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 RFPL2O75678 378 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 DGAT1O75907 488 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 NPTXRO95502 500 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 AKAP5P24588 427 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 FOSBP53539 338 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 DSG1Q02413 1049 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms