RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NIFKQ9BYG3 293 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 SLC39A2Q9NP94 309 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 CYP26B1Q9NR63 512 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 OLFML3Q9NRN5 406 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 ERAP1Q9NZ08 941 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 LARSQ9P2J5 1176 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 KCNG1Q9UIX4 513 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RWDD2AQ9UIY3 292 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RALYQ9UKM9 306 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 ZNF215Q9UL58 517 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 PCDHGC5Q9Y5F6 944 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 CHD8Q9HCK8 2581 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 HIP1RO75146 1068 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 STBD1O95210 358 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 RB1P06400 928 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 NRIP1P48552 1158 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 PSEN2P49810 448 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 ZNF131P52739 623 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-208ENST00000553868 STK4Q13043 487 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 DGKDQ16760 1214 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 TPD52L1Q16890 204 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-208ENST00000553868 PLA2G4FQ68DD2 849 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 DHX40Q8IX18 779 aaKnown RBP15.9■□□□□ 0.14
SHMT2-208ENST00000553868 SMYD4Q8IYR2 804 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-208ENST00000553868 MYCT1Q8N699 235 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 EFHBQ8N7U6 833 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 ATP8B4Q8TF62 1192 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 NELFBQ8WX92 580 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 KIFAP3Q92845 792 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 PCYT2Q99447 389 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 JPH2Q9BR39 696 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-208ENST00000553868 ATP6V0A4Q9HBG4 840 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 CTNND2Q9UQB3 1225 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 TELO2Q9Y4R8 837 aa15.9■□□□□ 0.14
SHMT2-208ENST00000553868 HBP1O60381 514 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 MAPTP10636 758 aaKnown RBP15.89■□□□□ 0.13
SHMT2-208ENST00000553868 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
SHMT2-208ENST00000553868 POLGP54098 1239 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-208ENST00000553868 NPEPPSP55786 919 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 ALCAMQ13740 583 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 MTERF2Q49AM1 385 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 SPATA1Q5VX52 437 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 SLC7A3Q8WY07 619 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 MRPL44Q9H9J2 332 aaKnown RBP15.89■□□□□ 0.13
SHMT2-208ENST00000553868 C17orf75Q9HAS0 396 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 MYO10Q9HD67 2058 aa15.89■□□□□ 0.13
SHMT2-208ENST00000553868 GAS2O43903 313 aaKnown RBP15.88■□□□□ 0.13
SHMT2-208ENST00000553868 LGALS2P05162 132 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 HOXD8P13378 290 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-208ENST00000553868 ATP4AP20648 1035 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 CCNE1P24864 410 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 ABCD1P33897 745 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 MFSD10Q14728 455 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 KIAA0753Q2KHM9 967 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 ODR4Q5SWX8 454 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 FOXR2Q6PJQ5 311 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 TRMT1LQ7Z2T5 733 aaKnown RBP15.88■□□□□ 0.13
SHMT2-208ENST00000553868 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
SHMT2-208ENST00000553868 SEPT8Q92599 483 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 P2RX5Q93086 422 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 TSG101Q99816 390 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 PLAGL2Q9UPG8 496 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 UBE4BO95155 1302 aa15.88■□□□□ 0.13
SHMT2-208ENST00000553868 ATRXP46100 2492 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 DOCK5Q9H7D0 1870 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 TMEM150BA6NC51 233 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 H0YCG3 227 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 EIF3DO15371 548 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHMT2-208ENST00000553868 FGFR1OPO95684 399 aaKnown RBP15.87■□□□□ 0.13
SHMT2-208ENST00000553868 CTSHP09668 335 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 PLS3P13797 630 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 SCP2P22307 547 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 MARK3P27448 753 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 LRRC63Q05C16 580 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 PUM1Q14671 1186 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHMT2-208ENST00000553868 PLCB4Q15147 1175 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 ZNF484Q5JVG2 852 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 FAM102BQ5T8I3 360 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 SUSD6Q92537 303 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 IFT74Q96LB3 600 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 PCDHB13Q9Y5F0 798 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
SHMT2-208ENST00000553868 GCNT3O95395 438 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 SMTNP53814 917 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 TBC1D8BQ0IIM8 1120 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 MAPK7Q13164 816 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 NCAPHQ15003 741 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 EMC2Q15006 297 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 PPP2R5AQ15172 486 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 TARBP2Q15633 366 aaKnown RBP15.86■□□□□ 0.13
SHMT2-208ENST00000553868 ASTLQ6HA08 431 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms