RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CDKAL1Q5VV42 579 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 TWF2Q6IBS0 349 aaKnown RBP15.4■□□□□ 0.06
PRKCH-206ENST00000553830 NOTUMQ6P988 496 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 FAM186BQ8IYM0 893 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 GPD1LQ8N335 351 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 KCNN1Q92952 543 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 APOL6Q9BWW8 343 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
PRKCH-206ENST00000553830 CDT1Q9H211 546 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 ERVK-5Q9HDB9 667 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 AGPAT5Q9NUQ2 364 aa15.4■□□□□ 0.06
PRKCH-206ENST00000553830 GPR182O15218 404 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 SERPINC1P01008 464 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 ADRB2P07550 413 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 HOXA11P31270 313 aaPredicted RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 PSMC2P35998 433 aaKnown RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 SNRPFP62306 86 aaKnown RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 TCP11X2Q5H9J9 407 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 DEFB128Q7Z7B8 93 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 C12orf56Q8IXR9 622 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 CEP120Q8N960 986 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 ANKRD20A12PQ8NF67 263 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 FAM212AQ96EL1 285 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM6Q9C030 488 aaPredicted RBP15.39■□□□□ 0.05
PRKCH-206ENST00000553830 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 DMAC2Q9NW81 257 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 PADI3Q9ULW8 664 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 STYXL1Q9Y6J8 313 aa15.39■□□□□ 0.05
PRKCH-206ENST00000553830 A0A0B4J269 797 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 ABLIM1O14639 778 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
PRKCH-206ENST00000553830 EXTL3O43909 919 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 ZNF18P17022 549 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 PROZP22891 400 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 AXLP30530 894 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 TNFSF9P41273 254 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 FANCCQ00597 558 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 MCL1Q07820 350 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 RBL2Q08999 1139 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 KRT31Q15323 416 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 SNRNP35Q16560 246 aaKnown RBP15.38■□□□□ 0.05
PRKCH-206ENST00000553830 NFIL3Q16649 462 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 UVSSAQ2YD98 709 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 FOXR2Q6PJQ5 311 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
PRKCH-206ENST00000553830 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 WNT8AQ9H1J5 351 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 VPS16Q9H269 839 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 PTPRHQ9HD43 1115 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
PRKCH-206ENST00000553830 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM43BA6NCK2 446 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 OGTO15294 1046 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 NBNO60934 754 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 GNA14O95837 355 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM49P0CI25 452 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM49CP0CI26 452 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 MCF2P10911 925 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 KRT13P13646 458 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
PRKCH-206ENST00000553830 SPAG1Q07617 926 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 PCBP1Q15365 356 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRKCH-206ENST00000553830 DCAF4L1Q3SXM0 396 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 SLC27A1Q6PCB7 646 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TMEM192Q8IY95 271 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TNS4Q8IZW8 715 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM43Q96BQ3 446 aaPredicted RBP15.37■□□□□ 0.05
PRKCH-206ENST00000553830 CCDC127Q96BQ5 260 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 IFIH1Q9BYX4 1025 aaKnown RBP15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TRIM5Q9C035 493 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 IFNKQ9P0W0 207 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 ARMCX3Q9UH62 379 aaPredicted RBP15.37■□□□□ 0.05
PRKCH-206ENST00000553830 HES2Q9Y543 173 aa15.37■□□□□ 0.05
PRKCH-206ENST00000553830 MICAL3Q7RTP6 2002 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 PDCD11Q14690 1871 aaKnown RBP15.36■□□□□ 0.05
PRKCH-206ENST00000553830 ZNF233A6NK53 670 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 AP5Z1O43299 807 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 MGEA5O60502 916 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 LDHAP00338 332 aaKnown RBP15.36■□□□□ 0.05
PRKCH-206ENST00000553830 TPM2P07951 284 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 STAG3L1P0CL83 205 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 RAG1P15918 1043 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 EEF1GP26641 437 aaKnown RBP15.36■□□□□ 0.05
PRKCH-206ENST00000553830 MRE11P49959 708 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
PRKCH-206ENST00000553830 MYBPC2Q14324 1141 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
PRKCH-206ENST00000553830 UBXN11Q5T124 520 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms