RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SLFN12LQ6IEE8 588 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 PLPPR4Q7Z2D5 763 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 ANKRD23Q86SG2 305 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 ACRBPQ8NEB7 543 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 GPRC5AQ8NFJ5 357 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 UBXN4Q92575 508 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 SECISBP2LQ93073 1101 aaKnown RBP7.95□□□□□ -1.14
ATXN3-221ENST00000553498 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 ALS2CR12Q96Q35 445 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 WDR24Q96S15 920 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 MMP19Q99542 508 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 STK33Q9BYT3 514 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 IFIH1Q9BYX4 1025 aaKnown RBP7.95□□□□□ -1.14
ATXN3-221ENST00000553498 AZI2Q9H6S1 392 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 GCNT4Q9P109 453 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 ARHGAP28Q9P2N2 729 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 RBPJLQ9UBG7 517 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 CDC23Q9UJX2 597 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF215Q9UL58 517 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-221ENST00000553498 INTUQ9ULD6 942 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 REXO2Q9Y3B8 237 aaKnown RBP7.95□□□□□ -1.14
ATXN3-221ENST00000553498 PCDHA13Q9Y5I0 950 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 SYNGAP1Q96PV0 1343 aa7.95□□□□□ -1.14
ATXN3-221ENST00000553498 DENND3A2RUS2 1198 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CCDC169A6NNP5 214 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 EPHB6O15197 1021 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 LILRA1O75019 489 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 LGR5O75473 907 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 LDHAP00338 332 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 PIGRP01833 764 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 UBA1P22314 1058 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CNGA1P29973 690 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 EIF4A3P38919 411 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 MAGEA1P43355 309 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CASP4P49662 377 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 STAT5BP51692 787 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 VAMP7P51809 220 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 EFNA5P52803 228 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 POLGP54098 1239 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 JAM2P57087 298 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 MYL7Q01449 175 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 KCNA1Q09470 495 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 KLHL30Q0D2K2 578 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 STRN3Q13033 797 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 BMS1Q14692 1282 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 EAPPQ56P03 285 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 TDRD12Q587J7 1177 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 UTP14CQ5TAP6 766 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 PAPD7Q5XG87 772 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 IQCEQ6IPM2 695 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 DPY19L2P1Q6NXN4 242 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 SRGAP1Q7Z6B7 1085 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CCDC60Q8IWA6 550 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 MSL3Q8N5Y2 521 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 TCP11Q8WWU5 503 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 PAGR1Q9BTK6 254 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 PORCNQ9H237 461 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 DHX33Q9H6R0 707 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 MLXIPQ9HAP2 919 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 ZCCHC17Q9NP64 241 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 ARGLU1Q9NWB6 273 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 HSPBP1Q9NZL4 362 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 RNF14Q9UBS8 474 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 MORF4L1Q9UBU8 362 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 APEX2Q9UBZ4 518 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 DIS3Q9Y2L1 958 aaKnown RBP7.94□□□□□ -1.14
ATXN3-221ENST00000553498 JRKLQ9Y4A0 524 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 EMSYQ7Z589 1322 aa7.94□□□□□ -1.14
ATXN3-221ENST00000553498 A0A0G2JMZ2 1700 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 NKRFO15226 690 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 SLC16A4O15374 487 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 RRP9O43818 475 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 ZC3H11AO75152 810 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 HOXC6P09630 235 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 ARL2P36404 184 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 CYP2J2P51589 502 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 AP3M2P53677 418 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 NPEPPSP55786 919 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 SP2Q02086 613 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 CNTN2Q02246 1040 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 CKAP4Q07065 602 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 NCBP1Q09161 790 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 RAPGEF1Q13905 1077 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 MXD4Q14582 209 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 TTLL4Q14679 1199 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 EMC2Q15006 297 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 TARBP2Q15633 366 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 CELF3Q5SZQ8 465 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 IER5Q5VY09 327 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 PLA2G4FQ68DD2 849 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 SEPT14Q6ZU15 432 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 ENOSF1Q7L5Y1 443 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 IRF2BP2Q7Z5L9 587 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms