RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 MCL1Q07820 350 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 TMEM132AQ24JP5 1023 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 FAM47CQ5HY64 1035 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 GDF6Q6KF10 455 aaPredicted RBP19.13■□□□□ 0.65
PSEN1-206ENST00000553447 CRELD2Q6UXH1 353 aaPredicted RBP19.13■□□□□ 0.65
PSEN1-206ENST00000553447 GBP6Q6ZN66 633 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 ZBTB33Q86T24 672 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 ZNF710Q8N1W2 664 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 CCDC112Q8NEF3 446 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 NEK11Q8NG66 645 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 TSEN34Q9BSV6 310 aaKnown RBP19.13■□□□□ 0.65
PSEN1-206ENST00000553447 CRACR2AQ9BSW2 395 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 TCHPQ9BT92 498 aa19.13■□□□□ 0.65
PSEN1-206ENST00000553447 FAM207AQ9NSI2 230 aaPredicted RBP19.13■□□□□ 0.65
PSEN1-206ENST00000553447 GRIN2DO15399 1336 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 EPHB6O15197 1021 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 NRDCO43847 1150 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 STX10O60499 249 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 N4BP1O75113 896 aaKnown RBP19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CSDE1O75534 798 aaKnown RBP19.12■□□□□ 0.65
PSEN1-206ENST00000553447 HARSP12081 509 aaKnown RBP19.12■□□□□ 0.65
PSEN1-206ENST00000553447 KRT9P35527 623 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 ACOT2P49753 483 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 MYL7Q01449 175 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 PPP3CAQ08209 521 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 NOLC1Q14978 699 aaKnown RBP eCLIP19.12■□□□□ 0.65
PSEN1-206ENST00000553447 PSMD6Q15008 389 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 EXOC3L4Q17RC7 722 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 ZNF568Q3ZCX4 644 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CBWD6Q4V339 395 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CBWD3Q5JTY5 395 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CBWD5Q5RIA9 395 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 ZBTB41Q5SVQ8 909 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 EEF1DP3Q658K8 133 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 USP37Q86T82 979 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 DNAJC5GQ8N7S2 189 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 PARD3BQ8TEW8 1205 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CCDC127Q96BQ5 260 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 OSMRQ99650 979 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 EDEM3Q9BZQ6 932 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 TMX1Q9H3N1 280 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 CDHR5Q9HBB8 845 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 PYCARDQ9ULZ3 195 aa19.12■□□□□ 0.65
PSEN1-206ENST00000553447 LUC7L2Q9Y383 392 aaKnown RBP19.12■□□□□ 0.65
PSEN1-206ENST00000553447 LRRIQ3A6PVS8 624 aaPredicted RBP19.11■□□□□ 0.65
PSEN1-206ENST00000553447 OGTO15294 1046 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 P4HA2O15460 535 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 FAM189A1O60320 539 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 TSPAN1O60635 241 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ERLIN2O94905 339 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 SKILP12757 684 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 DARSP14868 501 aaKnown RBP19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ARF4P18085 180 aaPredicted RBP19.11■□□□□ 0.65
PSEN1-206ENST00000553447 SLC9A1P19634 815 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 PON1P27169 355 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ZBED6P86452 979 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 TMEM139Q8IV31 216 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ARRDC4Q8NCT1 418 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 UNC93B1Q9H1C4 597 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ABHD10Q9NUJ1 306 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 AGPAT5Q9NUQ2 364 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 RBAKQ9NYW8 714 aaPredicted RBP19.11■□□□□ 0.65
PSEN1-206ENST00000553447 GCNT4Q9P109 453 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 GINS2Q9Y248 185 aa19.11■□□□□ 0.65
PSEN1-206ENST00000553447 ESPNB1AK53 854 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 PMM2O15305 246 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 NOL4O94818 638 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 GCLMP48507 274 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 PTPN11Q06124 597 aaPredicted RBP19.1■□□□□ 0.65
PSEN1-206ENST00000553447 ITGA7Q13683 1181 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
PSEN1-206ENST00000553447 DPY19L2P1Q6NXN4 242 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 SERINC5Q86VE9 423 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 CPB2Q96IY4 423 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 BAG1Q99933 345 aaPredicted RBP19.1■□□□□ 0.65
PSEN1-206ENST00000553447 CDT1Q9H211 546 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 GANQ9H2C0 597 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 PDZD7Q9H5P4 517 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 CEP72Q9P209 647 aa19.1■□□□□ 0.65
PSEN1-206ENST00000553447 RPLP2P05387 115 aaKnown RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 MCF2P10911 925 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 FGFR4P22455 802 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 FECHP22830 423 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 EIF4BP23588 611 aaKnown RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 MSNP26038 577 aaKnown RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 GTF2H1P32780 548 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 MXI1P50539 228 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 CRYBB1P53674 252 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 MRPS6P82932 125 aaKnown RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 SNX17Q15036 470 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 SLC9C1Q4G0N8 1177 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 SEZ6Q53EL9 994 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 RSPH3Q86UC2 560 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 CDR2LQ86X02 465 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 BRSK2Q8IWQ3 736 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 ZNF397Q8NF99 534 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 OR8K1Q8NGG5 319 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 VTI1AQ96AJ9 217 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 GLT1D1Q96MS3 346 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms