RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
ATXN3-217ENST00000553287 FAM126AQ9BYI3 521 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-217ENST00000553287 WRNQ14191 1432 aaPredicted RBP eCLIP6.49□□□□□ -1.37
ATXN3-217ENST00000553287 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 TMEM127O75204 238 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 GYPEP15421 78 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 HK1P19367 917 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
ATXN3-217ENST00000553287 MEF2AQ02078 507 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-217ENST00000553287 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-217ENST00000553287 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 FBXO41Q8TF61 875 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 PAWRQ96IZ0 340 aaKnown RBP6.48□□□□□ -1.37
ATXN3-217ENST00000553287 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
ATXN3-217ENST00000553287 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 C14orf119Q9NWQ9 140 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 HDAC5Q9UQL6 1122 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 CUL7Q14999 1698 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
ATXN3-217ENST00000553287 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 KLRG2A4D1S0 409 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 NARSO43776 548 aaKnown RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 DNAJC6O75061 913 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 PRKD3O94806 890 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 POU3F3P20264 500 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 CCT2P78371 535 aaKnown RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 APBA1Q02410 837 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 C1QL3Q5VWW1 255 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 SPATS2Q86XZ4 545 aaKnown RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 ZFPM1Q8IX07 1006 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 GLB1L3Q8NCI6 653 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 AUTS2Q8WXX7 1259 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 FATE1Q969F0 183 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 CDC5LQ99459 802 aaKnown RBP6.47□□□□□ -1.37
ATXN3-217ENST00000553287 SRRDQ9UH36 339 aa6.47□□□□□ -1.37
ATXN3-217ENST00000553287 ERICH3Q5RHP9 1530 aa6.46□□□□□ -1.37
ATXN3-217ENST00000553287 GASTP01350 101 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 MTHFD2P13995 350 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-217ENST00000553287 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-217ENST00000553287 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 COG1Q8WTW3 980 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 TSPEARQ8WU66 669 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 ORAI2Q96SN7 254 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 PDCD2LQ9BRP1 358 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 IFT122Q9HBG6 1241 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 BIVM-ERCC5R4GMW8 1640 aa6.46□□□□□ -1.38
ATXN3-217ENST00000553287 ZMYM3Q14202 1370 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 PHLDB1Q86UU1 1377 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 CYR61O00622 381 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 AKR1B10O60218 316 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 FAM20BO75063 409 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 ITGA10O75578 1167 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 ZNF202O95125 648 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 HSP90B1P14625 803 aaKnown RBP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 GPR3P46089 330 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 SLC25A3Q00325 362 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 MUM1Q2TAK8 710 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 RABL3Q5HYI8 236 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 FNDC7Q5VTL7 733 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 BTNL9Q6UXG8 535 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 HTR3DQ70Z44 454 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 KCNK18Q7Z418 384 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 XYLT1Q86Y38 959 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 GPR156Q8NFN8 814 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 RIN2Q8WYP3 895 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 LSM14BQ9BX40 385 aaKnown RBP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 SLC2A4RGQ9NR83 387 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 GPRC5DQ9NZD1 345 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 REXO2Q9Y3B8 237 aaKnown RBP6.45□□□□□ -1.38
ATXN3-217ENST00000553287 TOP2BQ02880 1626 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 ABCC2Q92887 1545 aa6.45□□□□□ -1.38
ATXN3-217ENST00000553287 PHF2O75151 1096 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 DCAF17Q5H9S7 520 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 METTL24Q5JXM2 366 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 RNF187Q5TA31 235 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 NAIF1Q69YI7 327 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 MDM1Q8TC05 714 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 SORCS2Q96PQ0 1159 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 MMRN2Q9H8L6 949 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 SPON1Q9HCB6 807 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 DNAJC28Q9NX36 388 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 MCM8Q9UJA3 840 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-217ENST00000553287 LMTK3Q96Q04 1460 aa6.44□□□□□ -1.38
ATXN3-217ENST00000553287 PTPRGP23470 1445 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 PRR5-ARHGAP8B1AHC4 643 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 PEX11BO96011 259 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 SLPIP03973 132 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms