RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 SPATA31C1P0DKV0 1188 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 RFC5P40937 340 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MTHFRP42898 656 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 CLCN5P51795 746 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 AMPD3Q01432 767 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 KANK3Q6NY19 840 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 USP49Q70CQ1 688 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 SV2BQ7L1I2 683 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 LRRC43Q8N309 656 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 C12orf76Q8N812 135 aaPredicted RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 RAD54LQ92698 747 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MTRQ99707 1265 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MMTAG2Q9BU76 263 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MFSD1Q9H3U5 465 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 CUEDC2Q9H467 287 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MAGEF1Q9HAY2 307 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 CYP26B1Q9NR63 512 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 DBR1Q9UK59 544 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 AKT3Q9Y243 479 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 C2orf16Q68DN1 1984 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 A0A087WWV3 80 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 TMEM150BA6NC51 233 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 HOXA2O43364 376 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 DGAT1O75907 488 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 C22orf31O95567 290 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM116-218ENST00000552839 NPEPPSP55786 919 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 EMC2Q15006 297 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 CLLU1OSQ5K130 101 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 CWF19L1Q69YN2 538 aaKnown RBP12.56□□□□□ -0.4
TMEM116-218ENST00000552839 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 ANO5Q75V66 913 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 GPBP1Q86WP2 473 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 ABI1Q8IZP0 508 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 SLC39A11Q8N1S5 342 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 TDRD5Q8NAT2 981 aaKnown RBP12.56□□□□□ -0.4
TMEM116-218ENST00000552839 CNNM3Q8NE01 707 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 MCPH1Q8NEM0 835 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 PNMA5Q96PV4 448 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 WRAP73Q9P2S5 460 aaPredicted RBP12.56□□□□□ -0.4
TMEM116-218ENST00000552839 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 DCHS1Q96JQ0 3298 aa12.56□□□□□ -0.4
TMEM116-218ENST00000552839 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 PI15O43692 258 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 GAS2O43903 313 aaKnown RBP12.55□□□□□ -0.4
TMEM116-218ENST00000552839 CXCL14O95715 111 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 ZSCAN20P17040 1043 aaPredicted RBP12.55□□□□□ -0.4
TMEM116-218ENST00000552839 CA8P35219 290 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 RARRES1P49788 294 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 NDUFA8P51970 172 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 NLRP11P59045 1033 aaKnown RBP12.55□□□□□ -0.4
TMEM116-218ENST00000552839 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 MCM6Q14566 821 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 HYIQ5T013 277 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 KIAA1841Q6NSI8 718 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 CLEC17AQ6ZS10 378 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 MAEAQ7L5Y9 396 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 FLCNQ8NFG4 579 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 TCP11Q8WWU5 503 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
TMEM116-218ENST00000552839 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
TMEM116-218ENST00000552839 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 DMDP11532 3685 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 ARID2Q68CP9 1835 aa12.55□□□□□ -0.4
TMEM116-218ENST00000552839 ZBTB39O15060 712 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
TMEM116-218ENST00000552839 FAM13AO94988 1023 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 EOMESO95936 686 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 MBD3O95983 291 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 EPCAMP16422 314 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 NPR3P17342 541 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 CLCN3P51790 818 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 BCAR1P56945 870 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ASIC1P78348 528 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ECM1Q16610 540 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 EFCAB12Q6NXP0 572 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 LRRC71Q8N4P6 559 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 RNF169Q8NCN4 708 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 AUTS2Q8WXX7 1259 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ZNF668Q96K58 619 aaPredicted RBP12.54□□□□□ -0.4
TMEM116-218ENST00000552839 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms