RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 C2CD2LO14523 706 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 PI15O43692 258 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 GLUD1P00367 558 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 ARL2P36404 184 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 OR1G1P47890 313 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 GLUD2P49448 558 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 CCDC105Q8IYK2 499 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 NSUN7Q8NE18 718 aaKnown RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 FLCNQ8NFG4 579 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 ZNF707Q96C28 371 aaPredicted RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 RTP3Q9BQQ7 232 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 PLEKHA4Q9H4M7 779 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
CKAP4-202ENST00000552828 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 ANKEF1Q9NU02 776 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 HES2Q9Y543 173 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
CKAP4-202ENST00000552828 MARCH6O60337 910 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 NR1I2O75469 434 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 DGAT1O75907 488 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
CKAP4-202ENST00000552828 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
CKAP4-202ENST00000552828 MLH1P40692 756 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 SCNN1GP51170 649 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 FOXK2Q01167 660 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 TFDP1Q14186 410 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 FRMD5Q7Z6J6 570 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 SIX5Q8N196 739 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 STAMQ92783 540 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 ZFP42Q96MM3 310 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
CKAP4-202ENST00000552828 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.3
CKAP4-202ENST00000552828 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
CKAP4-202ENST00000552828 CLUHO75153 1309 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 A0A1B0GUA9 196 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 F8W810 466 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
CKAP4-202ENST00000552828 JAK2O60674 1132 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 DTNBO60941 627 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 RFPL2O75678 378 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
CKAP4-202ENST00000552828 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
CKAP4-202ENST00000552828 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 CAPSQ13938 189 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 SLC44A3Q8N4M1 653 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 DTWD2Q8NBA8 298 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 NKD2Q969F2 451 aaPredicted RBP13.15□□□□□ -0.3
CKAP4-202ENST00000552828 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.3
CKAP4-202ENST00000552828 FBXL21Q9UKT6 434 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
CKAP4-202ENST00000552828 FAM205CA6NFA0 338 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 TGM5O43548 720 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 GLRA2P23416 452 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
CKAP4-202ENST00000552828 NR5A1Q13285 461 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 ANGPT1Q15389 498 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 FUT10Q6P4F1 479 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 RSAD2Q8WXG1 361 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
CKAP4-202ENST00000552828 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 MYADMQ96S97 322 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
CKAP4-202ENST00000552828 ADAM28Q9UKQ2 775 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 DCHS1Q96JQ0 3298 aa13.14□□□□□ -0.31
CKAP4-202ENST00000552828 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 ANHXE9PGG2 379 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 B4GALT5O43286 388 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
CKAP4-202ENST00000552828 SPATA31D3P0C874 917 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 SRFP11831 508 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 LAMP2P13473 410 aa13.13□□□□□ -0.31
CKAP4-202ENST00000552828 AKAP5P24588 427 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms