RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 C1RP00736 705 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 AXLP30530 894 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 HTR4Q13639 388 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 TOB2Q14106 344 aaPredicted RBP18.19■□□□□ 0.5
RAB5C-209ENST00000552162 OTOGLQ3ZCN5 2332 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 XKR9Q5GH70 373 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 FUT10Q6P4F1 479 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 OTUD6AQ7L8S5 288 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
RAB5C-209ENST00000552162 MTRQ99707 1265 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 HINFPQ9BQA5 517 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 COLEC11Q9BWP8 271 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
RAB5C-209ENST00000552162 DLGAP2Q9P1A6 1054 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 SIT1Q9Y3P8 196 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 NUMBLQ9Y6R0 609 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
RAB5C-209ENST00000552162 MIA3Q5JRA6 1907 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 ANHXE9PGG2 379 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 INO80B-WBP1J3KQ70 363 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 SP9P0CG40 484 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 PTENP60484 403 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 EPHA7Q15375 998 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 USP41Q3LFD5 358 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 DCLRE1AQ6PJP8 1040 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 POTEGQ6S5H5 508 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 C1orf210Q8IVY1 113 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 ST13P5Q8NFI4 369 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-209ENST00000552162 GPR62Q9BZJ7 368 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 PRKD2Q9BZL6 878 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-209ENST00000552162 NXF3Q9H4D5 531 aaKnown RBP18.18■□□□□ 0.5
RAB5C-209ENST00000552162 SLC2A4RGQ9NR83 387 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 RGL1Q9NZL6 768 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 FNIP2Q9P278 1114 aa18.18■□□□□ 0.5
RAB5C-209ENST00000552162 CCDC194A0A1B0GVG4 234 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
RAB5C-209ENST00000552162 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
RAB5C-209ENST00000552162 CREMQ03060 361 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
RAB5C-209ENST00000552162 MXD4Q14582 209 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-209ENST00000552162 NCAPH2Q6IBW4 605 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 LILRA6Q6PI73 481 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-209ENST00000552162 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 HACE1Q8IYU2 909 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 PJA1Q8NG27 643 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 HAS1Q92839 578 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 DYDC2Q96IM9 177 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 ADAM28Q9UKQ2 775 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 KCNJ14Q9UNX9 436 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 CEP250Q9BV73 2442 aa18.17■□□□□ 0.5
RAB5C-209ENST00000552162 DOCK6Q96HP0 2047 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 MED19A0JLT2 244 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-209ENST00000552162 ZBTB39O15060 712 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 TBX3O15119 743 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
RAB5C-209ENST00000552162 ZMYND10O75800 440 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 CYP4A11Q02928 519 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 MBTD1Q05BQ5 628 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 TFDP1Q14186 410 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 CTTNQ14247 550 aaKnown RBP18.16■□□□□ 0.5
RAB5C-209ENST00000552162 RUFY3Q7L099 469 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 IFNLR1Q8IU57 520 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-209ENST00000552162 GSTCDQ8NEC7 633 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 FOXQ1Q9C009 403 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 ZSWIM4Q9H7M6 989 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 ZFP37Q9Y6Q3 630 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-209ENST00000552162 CACNA1IQ9P0X4 2223 aa18.16■□□□□ 0.5
RAB5C-209ENST00000552162 POTEMA6NI47 508 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 MARCH6O60337 910 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 GLULP15104 373 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 ARF4P18085 180 aaPredicted RBP18.15■□□□□ 0.5
RAB5C-209ENST00000552162 FSHRP23945 695 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 AKAP5P24588 427 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 GRIK3Q13003 919 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 STK3Q13188 491 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 CAPSQ13938 189 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 AMHR2Q16671 573 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 CPLX2Q6PUV4 134 aaKnown RBP18.15■□□□□ 0.5
RAB5C-209ENST00000552162 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 RUBCNQ92622 972 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 RABGGTAQ92696 567 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 ZNF274Q96GC6 653 aaPredicted RBP18.15■□□□□ 0.5
RAB5C-209ENST00000552162 LARP6Q9BRS8 491 aaKnown RBP18.15■□□□□ 0.5
RAB5C-209ENST00000552162 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 COL4A3Q01955 1670 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 ZMYM2Q9UBW7 1377 aa18.15■□□□□ 0.5
RAB5C-209ENST00000552162 PATJQ8NI35 1801 aa18.14■□□□□ 0.5
RAB5C-209ENST00000552162 B4GALT5O43286 388 aa18.14■□□□□ 0.49
RAB5C-209ENST00000552162 LRRN2O75325 713 aa18.14■□□□□ 0.49
RAB5C-209ENST00000552162 STARD6P59095 220 aa18.14■□□□□ 0.49
RAB5C-209ENST00000552162 POU5F1BQ06416 359 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms