RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
DDX54-209ENST00000551912 CASD1Q96PB1 797 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 ACCSQ96QU6 501 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 APOL6Q9BWW8 343 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 FGFBP2Q9BYJ0 223 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 CDT1Q9H211 546 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 RSAD1Q9HA92 442 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 ANKFY1Q9P2R3 1169 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 EXOC7Q9UPT5 735 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 COL4A6Q14031 1691 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 LINC01553A4QN01 128 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 CLDN3O15551 220 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 MCF2P10911 925 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 MATR3P43243 847 aaKnown RBP eCLIP20.44■□□□□ 0.86
DDX54-209ENST00000551912 TAP1Q03518 808 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 PSMD2Q13200 908 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 ZBTB33Q86T24 672 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 ELOA2Q8IYF1 753 aaPredicted RBP20.44■□□□□ 0.86
DDX54-209ENST00000551912 HELQQ8TDG4 1101 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 ZBTB45Q96K62 511 aaPredicted RBP20.44■□□□□ 0.86
DDX54-209ENST00000551912 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 CHD9Q3L8U1 2897 aa20.44■□□□□ 0.86
DDX54-209ENST00000551912 ABLIM1O14639 778 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 EIF3DO15371 548 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX54-209ENST00000551912 PRPF6O94906 941 aaKnown RBP20.43■□□□□ 0.86
DDX54-209ENST00000551912 ARHGEF15O94989 841 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 AKAP5P24588 427 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 KCNA1Q09470 495 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 PNOCQ13519 176 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX54-209ENST00000551912 ZNF697Q5TEC3 545 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 GLIS3Q8NEA6 775 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 MRPL9Q9BYD2 267 aaKnown RBP20.43■□□□□ 0.86
DDX54-209ENST00000551912 ZNF576Q9H609 170 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 TMEM206Q9H813 350 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 SLC39A2Q9NP94 309 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 PARP2Q9UGN5 583 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 GIT1Q9Y2X7 761 aa20.43■□□□□ 0.86
DDX54-209ENST00000551912 FNDC1Q4ZHG4 1894 aaPredicted RBP20.43■□□□□ 0.86
DDX54-209ENST00000551912 OFD1O75665 1012 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 HARSP12081 509 aaKnown RBP20.42■□□□□ 0.86
DDX54-209ENST00000551912 MCL1Q07820 350 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 KCNB1Q14721 858 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 EPM2AIP1Q7L775 607 aaPredicted RBP20.42■□□□□ 0.86
DDX54-209ENST00000551912 SYCP3Q8IZU3 236 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 LRRC43Q8N309 656 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 URGCPQ8TCY9 931 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 SNTG2Q9NY99 539 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 INPP5FQ9Y2H2 1132 aa20.42■□□□□ 0.86
DDX54-209ENST00000551912 CHD7Q9P2D1 2997 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 RHOBTB3O94955 611 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 SMC2O95347 1197 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 GRM5P41594 1212 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 STK4Q13043 487 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 NOMO2Q5JPE7 1267 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 SLFN12LQ6IEE8 588 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 SLC39A4Q6P5W5 647 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 THNSL1Q8IYQ7 743 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 CEP120Q8N960 986 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 ZNF507Q8TCN5 953 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 TGS1Q96RS0 853 aaKnown RBP20.41■□□□□ 0.86
DDX54-209ENST00000551912 CCDC94Q9BW85 323 aaPredicted RBP20.41■□□□□ 0.86
DDX54-209ENST00000551912 GDAQ9Y2T3 454 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 MRPL42Q9Y6G3 142 aaKnown RBP20.41■□□□□ 0.86
DDX54-209ENST00000551912 UBE4BO95155 1302 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 ZMYM2Q9UBW7 1377 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 SZT2Q5T011 3432 aa20.41■□□□□ 0.86
DDX54-209ENST00000551912 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 RECQL4O94761 1208 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 MLH1P40692 756 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 SCFD1Q8WVM8 642 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 CLP1Q92989 425 aaKnown RBP20.4■□□□□ 0.86
DDX54-209ENST00000551912 SMARCE1Q969G3 411 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 ZFP42Q96MM3 310 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 SAMD11Q96NU1 681 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 GAD1Q99259 594 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 MSTO1Q9BUK6 570 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 HAPLN2Q9GZV7 340 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 IKZF4Q9H2S9 585 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
DDX54-209ENST00000551912 SEMA6BQ9H3T3 888 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 TYW1Q9NV66 732 aaKnown RBP20.4■□□□□ 0.86
DDX54-209ENST00000551912 RMND1Q9NWS8 449 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 KANSL3Q9P2N6 904 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 RWDD3Q9Y3V2 267 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 STYXL1Q9Y6J8 313 aa20.4■□□□□ 0.86
DDX54-209ENST00000551912 A0A0B4J269 797 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 TISP43B9A030 160 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 INPPL1O15357 1258 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 YARSP54577 528 aaKnown RBP20.39■□□□□ 0.85
DDX54-209ENST00000551912 OSTNP61366 133 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 ERVK-21P61565 698 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 SPOUT1Q5T280 376 aaKnown RBP20.39■□□□□ 0.85
DDX54-209ENST00000551912 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 KIAA0895Q8NCT3 520 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 ACAP3Q96P50 834 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 GSDMAQ96QA5 445 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 RPS6KC1Q96S38 1066 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms