RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 TMEM117Q9H0C3 514 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 CDT1Q9H211 546 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 TYW1Q9NV66 732 aaKnown RBP16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 MIOSQ9NXC5 875 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 SNTG2Q9NY99 539 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 PARP2Q9UGN5 583 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 MTUS1Q9ULD2 1270 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 PCDHB13Q9Y5F0 798 aa16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 MRPL42Q9Y6G3 142 aaKnown RBP16.62■□□□□ 0.25
SMARCD1-211ENST00000551497 RFXAPO00287 272 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 TOM1L1O75674 476 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 RPN1P04843 607 aaKnown RBP16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 HARSP12081 509 aaKnown RBP16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 SCP2P22307 547 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 HOXD13P35453 343 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 LIG4P49917 911 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 OSTNP61366 133 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 POSTNQ15063 836 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 SEZ6Q53EL9 994 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 MAP4K3Q8IVH8 894 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 ABI1Q8IZP0 508 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 CEP120Q8N960 986 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 ZFP42Q96MM3 310 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 TIGD1Q96MW7 591 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 GAD1Q99259 594 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 C17orf80Q9BSJ5 609 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 RSAD1Q9HA92 442 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 ANKFY1Q9P2R3 1169 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 GDAQ9Y2T3 454 aa16.61■□□□□ 0.25
SMARCD1-211ENST00000551497 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 HNRNPDLO14979 420 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 HOXA2O43364 376 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 PIGRP01833 764 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 MYL1P05976 194 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 STK4Q13043 487 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 NOMO2Q5JPE7 1267 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 L1TD1Q5T7N2 865 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 ZNF697Q5TEC3 545 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 GLB1LQ6UWU2 654 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 EPM2AIP1Q7L775 607 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 THNSL1Q8IYQ7 743 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 ARNTL2Q8WYA1 636 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 GBP4Q96PP9 640 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 ACCSQ96QU6 501 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 CWH43Q9H720 699 aa16.6■□□□□ 0.25
SMARCD1-211ENST00000551497 LAMA3Q16787 3333 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 ARL5CA6NH57 179 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 CLDN3O15551 220 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 POMCP01189 267 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 MCF2P10911 925 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 MLH1P40692 756 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 ERVK-21P61565 698 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 MCL1Q07820 350 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 ZNF280BQ86YH2 543 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 GSTCDQ8NEC7 633 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 ZNF507Q8TCN5 953 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 SCFD1Q8WVM8 642 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 TBC1D13Q9NVG8 400 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 GIT1Q9Y2X7 761 aa16.59■□□□□ 0.25
SMARCD1-211ENST00000551497 A0A0B4J269 797 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 MEFVO15553 781 aaPredicted RBP16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 B4GALT3O60512 393 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 RECQL4O94761 1208 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 DDHD2O94830 711 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 ADSSP30520 456 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 ABCD1P33897 745 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 BMPR1AP36894 532 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 GRM5P41594 1212 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 PSMD2Q13200 908 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 ALCAMQ13740 583 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 EPC2Q52LR7 807 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 APBB1IPQ7Z5R6 666 aaPredicted RBP16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 KIAA0895Q8NCT3 520 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 CLP1Q92989 425 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 PRDM12Q9H4Q4 367 aa16.58■□□□□ 0.24
SMARCD1-211ENST00000551497 UBN1Q9NPG3 1134 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms