RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CXCL16Q9H2A7 254 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 TTC12Q9H892 705 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 RXFP1Q9HBX9 757 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 UBN1Q9NPG3 1134 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 GPRC5CQ9NQ84 441 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 ANKEF1Q9NU02 776 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 CFAP54Q96N23 3096 aa19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 PTPRZ1P23471 2315 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-215ENST00000551418 TTLL13PA6NNM8 815 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 NPTXRO95502 500 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 AXLP30530 894 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 GLUD2P49448 558 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 RARRES1P49788 294 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 TDGQ13569 410 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 ST13P5Q8NFI4 369 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 POLR3FQ9H1D9 316 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 MFSD1Q9H3U5 465 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 USP20Q9Y2K6 914 aa19.89■□□□□ 0.77
PRPF40B-215ENST00000551418 RPL17P18621 184 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 NUBP1P53384 320 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 DSG1Q02413 1049 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 POU5F1BQ06416 359 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 TFDP1Q14186 410 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 C15orf39Q6ZRI6 1047 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 NSUN7Q8NE18 718 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 CMASQ8NFW8 434 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 ZNF707Q96C28 371 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 CCDC51Q96ER9 411 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 MTMR9Q96QG7 549 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 MYADMQ96S97 322 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 PAAF1Q9BRP4 392 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 CHST7Q9NS84 486 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 GIT1Q9Y2X7 761 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 MYO15AQ9UKN7 3530 aa19.88■□□□□ 0.77
PRPF40B-215ENST00000551418 POTEMA6NI47 508 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 USO1O60763 962 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 DGAT1O75907 488 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 GLUD1P00367 558 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 ADH1AP07327 375 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 SPATA31C1P0DKV0 1188 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 CLCN5P51795 746 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 ST3GAL1Q11201 340 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 WASF1Q92558 559 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 GTF3C6Q969F1 213 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 IRF2BPLQ9H1B7 796 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 WDR6Q9NNW5 1121 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 STK39Q9UEW8 545 aa19.87■□□□□ 0.77
PRPF40B-215ENST00000551418 RIF1Q5UIP0 2472 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 PROB1E7EW31 1015 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 ATP2B1P20020 1258 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 GBP2P32456 591 aaPredicted RBP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 PCBP1Q15365 356 aaKnown RBP eCLIP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 FUT10Q6P4F1 479 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 DIS3L2Q8IYB7 885 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 SIX5Q8N196 739 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 SMG7Q92540 1137 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 COLEC11Q9BWP8 271 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 TRIM6Q9C030 488 aaPredicted RBP19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 PARP2Q9UGN5 583 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 DUSP12Q9UNI6 340 aa19.86■□□□□ 0.77
PRPF40B-215ENST00000551418 CLUHO75153 1309 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 A0A1B0GUA9 196 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 TGM5O43548 720 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 NEMFO60524 1076 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 MED24O75448 989 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 NCBP1Q09161 790 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 LILRA6Q6PI73 481 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 PRSS55Q6UWB4 352 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 FRMD5Q7Z6J6 570 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 RIN2Q8WYP3 895 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 BSNDQ8WZ55 320 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 NFKBIZQ9BYH8 718 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 NT5C3AQ9H0P0 336 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 POLD4Q9HCU8 107 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 SSX2IPQ9Y2D8 614 aa19.85■□□□□ 0.77
PRPF40B-215ENST00000551418 KRBA1A5PL33 1030 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 LRRIQ4A6NIV6 560 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 EDN1P05305 212 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 CFHP08603 1231 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 AOC1P19801 751 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 IGFBP6P24592 240 aaPredicted RBP19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 NBL1P41271 181 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 GUCY1B3Q02153 619 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 ANKRD1Q15327 319 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 SLC27A1Q6PCB7 646 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 CATSPER3Q86XQ3 398 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 SLC44A3Q8N4M1 653 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 HASPINQ8TF76 798 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 BRMS1Q9HCU9 246 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 ADAM28Q9UKQ2 775 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 FBXL21Q9UKT6 434 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 VPS13AQ96RL7 3174 aa19.84■□□□□ 0.77
PRPF40B-215ENST00000551418 FAM186AA6NE01 2351 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 SPTBN4Q9H254 2564 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 PRR23AA6NEV1 266 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 MCM7P33993 719 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 ANAPC15P60006 121 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 USP41Q3LFD5 358 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms