RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 AGPAT5Q9NUQ2 364 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 IFNKQ9P0W0 207 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 ANKFY1Q9P2R3 1169 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 GOLGA6L6A8MZA4 724 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 N4BP1O75113 896 aaKnown RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 RPS6KA5O75582 802 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 CHRNA1P02708 482 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 CKBP12277 381 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 ARF4P18085 180 aaPredicted RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 GTF2H1P32780 548 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 CETN1Q12798 172 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 NR1I3Q14994 352 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 ZNF568Q3ZCX4 644 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 HSP90AA4PQ58FG1 418 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 SLC27A1Q6PCB7 646 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 APTXQ7Z2E3 356 aaKnown RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 EEF2KMTQ96G04 330 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 BORCS6Q96GS4 357 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 ZNF668Q96K58 619 aaPredicted RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 XPO4Q9C0E2 1151 aaKnown RBP11.33□□□□□ -0.6
NEK3-203ENST00000551355 NDST4Q9H3R1 872 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 PCIF1Q9H4Z3 704 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 HTTP42858 3142 aa11.33□□□□□ -0.6
NEK3-203ENST00000551355 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 TISP43B9A030 160 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
NEK3-203ENST00000551355 ABLIM1O14639 778 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 PMM2O15305 246 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 P4HA2O15460 535 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 B4GALT5O43286 388 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 CLTAP09496 248 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 SELPP16109 830 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
NEK3-203ENST00000551355 CASP4P49662 377 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 VAMP7P51809 220 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 AP3M2P53677 418 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 BFSP1Q12934 665 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 DHX38Q92620 1227 aaKnown RBP11.32□□□□□ -0.6
NEK3-203ENST00000551355 TSPAN18Q96SJ8 248 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 VPS16Q9H269 839 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
NEK3-203ENST00000551355 GTPBP10A4D1E9 387 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 IL18RAPO95256 599 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 AFPP02771 609 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 EDN1P05305 212 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CTSHP09668 335 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 SKIP12755 728 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 UBXN1Q04323 297 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 PAK2Q13177 524 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 PSMD6Q15008 389 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 ZNF618Q5T7W0 954 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 TCERG1LQ5VWI1 586 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CBWD2Q8IUF1 395 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CD302Q8IX05 232 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 TMEM40Q8WWA1 233 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 WNT8BQ93098 351 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 SAAL1Q96ER3 474 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 ZBTB45Q96K62 511 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CCDC94Q9BW85 323 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 CDT1Q9H211 546 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 RBAKQ9NYW8 714 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 IMPACTQ9P2X3 320 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 ST3GAL5Q9UNP4 418 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 NOC2LQ9Y3T9 749 aaKnown RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
NEK3-203ENST00000551355 ITIH6Q6UXX5 1313 aa11.31□□□□□ -0.6
NEK3-203ENST00000551355 MYH11P35749 1972 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 GOLGA8IPA6NC78 632 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 GOLGA8JA6NMD2 632 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms