RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TMEM173Q86WV6 379 aaPredicted RBP20.91■□□□□ 0.94
DDX54-208ENST00000551344 COLGALT2Q8IYK4 626 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 VPS52Q8N1B4 723 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 GSTCDQ8NEC7 633 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 ZFP42Q96MM3 310 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 NRP1O14786 923 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 B4GALT3O60512 393 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 NR1I2O75469 434 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 CXCL14O95715 111 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 PLS3P13797 630 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 NDUFV1P49821 464 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 SCNN1GP51170 649 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 DSC1Q08554 894 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 GIT2Q14161 759 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 SLC39A14Q15043 492 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 DCAF4L1Q3SXM0 396 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 ARSHQ5FYA8 562 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 ATF7IP2Q5U623 682 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 RASSF8Q8NHQ8 419 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 FBXO2Q9UK22 296 aaPredicted RBP20.9■□□□□ 0.94
DDX54-208ENST00000551344 TNFSF13BQ9Y275 285 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 USP20Q9Y2K6 914 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 IRAK3Q9Y616 596 aa20.9■□□□□ 0.94
DDX54-208ENST00000551344 C2orf71A6NGG8 1288 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 HIDE1A8MVS5 230 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 TBX10O75333 385 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 EDN1P05305 212 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 CTSAP10619 480 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 PLCG1P19174 1290 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 DDIT3P35638 169 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 CEBPZQ03701 1054 aaKnown RBP20.89■□□□□ 0.93
DDX54-208ENST00000551344 RAD51AP2Q09MP3 1159 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.93
DDX54-208ENST00000551344 TMEM184AQ6ZMB5 413 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 MSLNLQ96KJ4 702 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 NECAB3Q96P71 396 aaPredicted RBP20.89■□□□□ 0.93
DDX54-208ENST00000551344 USP28Q96RU2 1077 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 MRPL4Q9BYD3 311 aaKnown RBP20.89■□□□□ 0.93
DDX54-208ENST00000551344 ZBP1Q9H171 429 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 BLOC1S4Q9NUP1 217 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 SNTG2Q9NY99 539 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 CLEC1BQ9P126 229 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 LARSQ9P2J5 1176 aaKnown RBP20.89■□□□□ 0.93
DDX54-208ENST00000551344 CCDC39Q9UFE4 941 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 CD207Q9UJ71 328 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 ODF2LQ9ULJ1 636 aa20.89■□□□□ 0.93
DDX54-208ENST00000551344 SLC16A4O15374 487 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 GRIK3Q13003 919 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 COASYQ13057 564 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 KCNC3Q14003 757 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 EEF1DP3Q658K8 133 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 BCL7CQ8WUZ0 217 aaPredicted RBP20.88■□□□□ 0.93
DDX54-208ENST00000551344 RAD54LQ92698 747 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 EPSTI1Q96J88 318 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 RPS6KC1Q96S38 1066 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 ACO2Q99798 780 aaKnown RBP20.88■□□□□ 0.93
DDX54-208ENST00000551344 KLK14Q9P0G3 267 aa20.88■□□□□ 0.93
DDX54-208ENST00000551344 H0YCG3 227 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 GLP2RO95838 553 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 SRGAP2BP0DMP2 458 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 IL9P15248 144 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 OR1G1P47890 313 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 NASPP49321 788 aaPredicted RBP20.87■□□□□ 0.93
DDX54-208ENST00000551344 SMAD4Q13485 552 aaKnown RBP20.87■□□□□ 0.93
DDX54-208ENST00000551344 TAS1R3Q7RTX0 852 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 GPBP1Q86WP2 473 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 FAM178BQ8IXR5 827 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 TMEM161BQ8NDZ6 487 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 LRRC15Q8TF66 581 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 LARP4BQ92615 738 aaKnown RBP20.87■□□□□ 0.93
DDX54-208ENST00000551344 ZNF396Q96N95 335 aaPredicted RBP20.87■□□□□ 0.93
DDX54-208ENST00000551344 COLEC11Q9BWP8 271 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 PTPRHQ9HD43 1115 aa20.87■□□□□ 0.93
DDX54-208ENST00000551344 NPHP3-ACAD11A0A0J9YXS1 232 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 MBTPS2O43462 519 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 RECQL4O94761 1208 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 SCP2P22307 547 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 TXLNAP40222 546 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 STRN3Q13033 797 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 DHX8Q14562 1220 aaKnown RBP20.86■□□□□ 0.93
DDX54-208ENST00000551344 MCM6Q14566 821 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 SMAD2Q15796 467 aaKnown RBP20.86■□□□□ 0.93
DDX54-208ENST00000551344 SPECC1Q5M775 1068 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 USP49Q70CQ1 688 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 KRI1Q8N9T8 703 aaKnown RBP20.86■□□□□ 0.93
DDX54-208ENST00000551344 TMEM87AQ8NBN3 555 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 KCNN1Q92952 543 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 CLIC6Q96NY7 704 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 TARS2Q9BW92 718 aaKnown RBP20.86■□□□□ 0.93
DDX54-208ENST00000551344 PRKAG3Q9UGI9 489 aa20.86■□□□□ 0.93
DDX54-208ENST00000551344 PRG3Q9Y2Y8 225 aaPredicted RBP20.86■□□□□ 0.93
DDX54-208ENST00000551344 THP07101 528 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 CLUL1Q15846 466 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 SMRP1Q8NCR6 262 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 VN1R2Q8NFZ6 395 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 REEP2Q9BRK0 252 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 VN1R3Q9BXE9 311 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 MARCH5Q9NX47 278 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
DDX54-208ENST00000551344 BARX2Q9UMQ3 279 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms