RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 BEND3Q5T5X7 828 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 TRMT10BQ6PF06 316 aaKnown RBP6.19□□□□□ -1.42
SCAF11-214ENST00000550893 KSR2Q6VAB6 950 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 C16orf59Q7L2K0 433 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 PPP1R42Q7Z4L9 355 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 OSTM1Q86WC4 334 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 FAM9BQ8IZU0 186 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 SLC7A14Q8TBB6 771 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 THAP3Q8WTV1 239 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-214ENST00000550893 PLA2G12BQ9BX93 195 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 TAF1DQ9H5J8 278 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-214ENST00000550893 SRPK3Q9UPE1 567 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 AKAP11Q9UKA4 1901 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 SSC5DA1L4H1 1573 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 FAM90A27PA6NNH2 459 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 SNAP23O00161 211 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 MAN2B1O00754 1011 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 ENO2P09104 434 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-214ENST00000550893 COL6A1P12109 1028 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 KRT15P19012 456 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 ALDH1B1P30837 517 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 JAM2P57087 298 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 PFKPQ01813 784 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 CXCL9Q07325 125 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 GCKRQ14397 625 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 CCDC30Q5VVM6 783 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 DLK2Q6UY11 383 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 FAM124AQ86V42 546 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 PTRH1Q86Y79 214 aaKnown RBP6.18□□□□□ -1.42
SCAF11-214ENST00000550893 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
SCAF11-214ENST00000550893 LGI4Q8N135 537 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 CCDC191Q8NCU4 936 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 GSTCDQ8NEC7 633 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 ZSWIM2Q8NEG5 633 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 TMEM168Q9H0V1 697 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 GREM2Q9H772 168 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 UTYO14607 1347 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 AOX1Q06278 1338 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 SIPA1L1O43166 1804 aa6.18□□□□□ -1.42
SCAF11-214ENST00000550893 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 ZNF839A8K0R7 811 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 CCER2I3L3R5 266 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 EFCAB14O75071 495 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 RASGRP1O95267 797 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 CSF1RP07333 972 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 PTPN1P18031 435 aaKnown RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 EPS15P42566 896 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 GLRBP48167 497 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 DNM2P50570 870 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 CALD1Q05682 793 aaKnown RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 C2orf27AQ580R0 203 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 TRIM61Q5EBN2 209 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 BORAQ6PGQ7 559 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 UBE3BQ7Z3V4 1068 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 RTKN2Q8IZC4 609 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 NLGN4XQ8N0W4 816 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 ANKRD44Q8N8A2 993 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 TBC1D16Q8TBP0 767 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 SSH1Q8WYL5 1049 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 RPGRQ92834 1020 aaKnown RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 RBM17Q96I25 401 aaKnown RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 RIC8BQ9NVN3 520 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 CWC25Q9NXE8 425 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 FTSJ1Q9UET6 329 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 ZFP69BQ9UJL9 534 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 PTCH2Q9Y6C5 1203 aa6.17□□□□□ -1.42
SCAF11-214ENST00000550893 ASTN2O75129 1339 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-214ENST00000550893 FOCADQ5VW36 1801 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 DOCK2Q92608 1830 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 KCNK3O14649 394 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 GSTA4O15217 222 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 B4GALT3O60512 393 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 PDE8AO60658 829 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 IL18BPO95998 194 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 VEGFAP15692 232 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 FSTL1Q12841 308 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 SMAD2Q15796 467 aaKnown RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 CRY1Q16526 586 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 TBC1D10BQ4KMP7 808 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 FAM47CQ5HY64 1035 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 FIGNQ5HY92 759 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 PRRT2Q7Z6L0 340 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 GPC2Q8N158 579 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 DNAAF4Q8WXU2 420 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 SCLYQ96I15 445 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 MAGEB10Q96LZ2 347 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 SMURF1Q9HCE7 757 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 SLC39A2Q9NP94 309 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 ARHGAP20Q9P2F6 1191 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms