RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ANKRD40Q6AI12 368 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 SLC27A1Q6PCB7 646 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 ZC3H3Q8IXZ2 948 aaKnown RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 SYCP3Q8IZU3 236 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 SMG8Q8ND04 991 aaKnown RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 P2RX5Q93086 422 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 CCDC51Q96ER9 411 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 DHTKD1Q96HY7 919 aaPredicted RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 DNAJC25Q9H1X3 360 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 CXCL16Q9H2A7 254 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 TMEM206Q9H813 350 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 CHST12Q9NRB3 414 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 RNF19AQ9NV58 838 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 TYW1Q9NV66 732 aaKnown RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 DMAC2Q9NW81 257 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 EXOC7Q9UPT5 735 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 TRAF3IP3Q9Y228 551 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 HES2Q9Y543 173 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 LAMA2P24043 3122 aaKnown RBP14.77□□□□□ -0.05
ERBB3-215ENST00000550828 COL6A3P12111 3177 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 PDXKO00764 312 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 LETM1O95202 739 aaPredicted RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 PFKMP08237 780 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 HARSP12081 509 aaKnown RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 WNT7BP56706 349 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 DEFB103AP81534 67 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 NOLC1Q14978 699 aaKnown RBP eCLIP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 ANO6Q4KMQ2 910 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 TWF2Q6IBS0 349 aaKnown RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 LRRC55Q6ZSA7 311 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 ZNF598Q86UK7 904 aaKnown RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 CRIPAKQ8N1N5 446 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 APBB2Q92870 758 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 TRAIPQ9BWF2 469 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 GTPBP4Q9BZE4 634 aaKnown RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 RGS18Q9NS28 235 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 FAM105AQ9NUU6 356 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 ANO10Q9NW15 660 aa14.76□□□□□ -0.05
ERBB3-215ENST00000550828 CXXC1Q9P0U4 656 aaPredicted RBP14.76□□□□□ -0.05
ERBB3-215ENST00000550828 GOLGA8IPA6NC78 632 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 GOLGA8JA6NMD2 632 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 PSMA7O14818 248 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 NR3C1P04150 777 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 ADRB2P07550 413 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 MCF2P10911 925 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 GARTP22102 1010 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 TNFSF9P41273 254 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 CASP4P49662 377 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 CYP2J2P51589 502 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 ZNF445P59923 1031 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 WDR5P61964 334 aaKnown RBP14.75□□□□□ -0.05
ERBB3-215ENST00000550828 FAM189BP81408 668 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 PAK1Q13153 545 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 NFIL3Q16649 462 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 TMEM132AQ24JP5 1023 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 C9orf50Q5SZB4 431 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 FAM109BQ6ICB4 259 aaPredicted RBP14.75□□□□□ -0.05
ERBB3-215ENST00000550828 ARMCX5Q6P1M9 558 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 OTOP2Q7RTS6 562 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 TMCO2Q7Z6W1 182 aaPredicted RBP14.75□□□□□ -0.05
ERBB3-215ENST00000550828 ECHDC2Q86YB7 292 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 RPUSD2Q8IZ73 545 aaKnown RBP14.75□□□□□ -0.05
ERBB3-215ENST00000550828 POMGNT1Q8WZA1 660 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 LPPQ93052 612 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 EEF2KMTQ96G04 330 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
ERBB3-215ENST00000550828 FTHL17Q9BXU8 183 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 HSPBP1Q9NZL4 362 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 IPPQ9Y573 584 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 PCDHB2Q9Y5E7 798 aa14.75□□□□□ -0.05
ERBB3-215ENST00000550828 NLRC5Q86WI3 1866 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 A0A0U1RQF3 1178 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 ABHD14A-ACY1A0A1B0GW23 586 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 OGTO15294 1046 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 CLDN3O15551 220 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 ZNF623O75123 536 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 CCDC192P0DO97 292 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 STIM1Q13586 685 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 DCAF4L1Q3SXM0 396 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 RASIP1Q5U651 963 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 AGMOQ6ZNB7 445 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 SLC24A5Q71RS6 500 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 HS2ST1Q7LGA3 356 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 MRPL10Q7Z7H8 261 aaKnown RBP14.74□□□□□ -0.05
ERBB3-215ENST00000550828 CBWD2Q8IUF1 395 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 SLC9A9Q8IVB4 645 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 THNSL1Q8IYQ7 743 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 TMEM174Q8WUU8 243 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 FBXL18Q96ME1 805 aa14.74□□□□□ -0.05
ERBB3-215ENST00000550828 MSTO1Q9BUK6 570 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms