RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	TNFSF13B	Q9Y275	285 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	USP20	Q9Y2K6	914 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NLRC5	Q86WI3	1866 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FSD2	A1L4K1	749 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NT5C1B-RDH14	C9J2C7	533 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FSCN2	O14926	492 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DDHD2	O94830	711 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GALT	P07902	379 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MAPT	P10636	758 aa	Known RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	STAT6	P42226	847 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SLC11A1	P49279	550 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SCNN1G	P51170	649 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZNF131	P52739	623 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	HYAL1	Q12794	435 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GIT2	Q14161	759 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZNF568	Q3ZCX4	644 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	EEF1DP3	Q658K8	133 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TAS1R3	Q7RTX0	852 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MYCT1	Q8N699	235 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	IGSF21	Q96ID5	467 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GBP4	Q96PP9	640 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	RPS6KC1	Q96S38	1066 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ACO2	Q99798	780 aa	Known RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TCF25	Q9BQ70	676 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NGRN	Q9NPE2	291 aa	Known RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ENTPD7	Q9NQZ7	604 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	STK39	Q9UEW8	545 aa		13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.12	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GOLGA6L22	H0YM25	854 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	B4GALT3	O60512	393 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CUTA	O60888	179 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NR1I2	O75469	434 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	RECQL4	O94761	1208 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ALDH2	P05091	517 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KCNA5	P22460	613 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ABCD1	P33897	745 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NCKAP1L	P55160	1127 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ERVFC1	P60507	584 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DSC1	Q08554	894 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GRIK3	Q13003	919 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	BMS1	Q14692	1282 aa	Known RBP	13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PLPP4	Q5VZY2	271 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SV2B	Q7L1I2	683 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ADGRD2	Q7Z7M1	963 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DDX53	Q86TM3	631 aa	Known RBP	13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TMEM173	Q86WV6	379 aa	Predicted RBP	13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KCNN1	Q92952	543 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CDT1	Q9H211	546 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZHX3	Q9H4I2	956 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PTPRH	Q9HD43	1115 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CLDND1	Q9NY35	253 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SNTG2	Q9NY99	539 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KLK14	Q9P0G3	267 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FAN1	Q9Y2M0	1017 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PCDHGC5	Q9Y5F6	944 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	EYS	Q5T1H1	3165 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KIAA1671	Q9BY89	1806 aa		13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.11	□□□□□ -0.31
ARFGAP1-223	ENST00000550188		K7ENM7	598 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NRP1	O14786	923 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TRAK2	O60296	914 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TOM1L1	O75674	476 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MCF2	P10911	925 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PROZ	P22891	400 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NRIP1	P48552	1158 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KCNQ1	P51787	676 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DNM1	Q05193	864 aa	Known RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SMC1A	Q14683	1233 aa	Known RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CTC1	Q2NKJ3	1217 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	LEXM	Q3ZCV2	418 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MPZL3	Q6UWV2	235 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZPBP2	Q6X784	338 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CLEC17A	Q6ZS10	378 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	EP400NL	Q6ZTU2	488 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TMC7	Q7Z402	723 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	HAUS6	Q7Z4H7	955 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	RBM23	Q86U06	439 aa	Known RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	COLGALT2	Q8IYK4	626 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	EFHB	Q8N7U6	833 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GSTCD	Q8NEC7	633 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DDX12P	Q92771	950 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SPATA32	Q96LK8	384 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CDCA3	Q99618	268 aa	Predicted RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TCHP	Q9BT92	498 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CCDC94	Q9BW85	323 aa	Predicted RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TARS2	Q9BW92	718 aa	Known RBP	13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	IGFLR1	Q9H665	355 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TLE6	Q9H808	572 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MIOS	Q9NXC5	875 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	RCOR1	Q9UKL0	485 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GDA	Q9Y2T3	454 aa		13.1	□□□□□ -0.31
ARFGAP1-223	ENST00000550188		A0A087X0B3	334 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ABLIM1	O14639	778 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TRANK1	O15050	2925 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	5e-11	■■■■□ 22.8
ARFGAP1-223	ENST00000550188	GRM5	P41594	1212 aa		13.09	□□□□□ -0.31

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