RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GBP2P32456 591 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-205ENST00000550013 DSG1Q02413 1049 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 TFDP1Q14186 410 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 CDR2LQ86X02 465 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-205ENST00000550013 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-205ENST00000550013 SIX5Q8N196 739 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 RABGGTAQ92696 567 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 TNFRSF25Q93038 417 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 WDR6Q9NNW5 1121 aaKnown RBP17.14■□□□□ 0.33
RAB5C-205ENST00000550013 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 CLUHO75153 1309 aa17.14■□□□□ 0.33
RAB5C-205ENST00000550013 A0A087WWV3 80 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 GLRA2P23416 452 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 AKAP5P24588 427 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 ARL2P36404 184 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB5C-205ENST00000550013 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 SMG7Q92540 1137 aaKnown RBP17.13■□□□□ 0.33
RAB5C-205ENST00000550013 ZNF707Q96C28 371 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-205ENST00000550013 MYADMQ96S97 322 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 HSD17B14Q9BPX1 270 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 GPR62Q9BZJ7 368 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-205ENST00000550013 KLK14Q9P0G3 267 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 IGSF9Q9P2J2 1179 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 GIT1Q9Y2X7 761 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 GVINP1Q7Z2Y8 2422 aa17.13■□□□□ 0.33
RAB5C-205ENST00000550013 WNT7AO00755 349 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 LYPLA2O95372 231 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 NPTXRO95502 500 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 CFHP08603 1231 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
RAB5C-205ENST00000550013 KRT2P35908 639 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 POU5F1BQ06416 359 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 NCBP1Q09161 790 aaKnown RBP17.12■□□□□ 0.33
RAB5C-205ENST00000550013 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 GLYCTKQ8IVS8 523 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 CCDC105Q8IYK2 499 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 GSTCDQ8NEC7 633 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 ANKEF1Q9NU02 776 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 CACNG4Q9UBN1 327 aa17.12■□□□□ 0.33
RAB5C-205ENST00000550013 NR1I2O75469 434 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 DGAT1O75907 488 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
RAB5C-205ENST00000550013 CALCRLQ16602 461 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 ELMSAN1Q6PJG2 1045 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-205ENST00000550013 STAMQ92783 540 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-205ENST00000550013 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 DPP7Q9UHL4 492 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
RAB5C-205ENST00000550013 KRBA1A5PL33 1030 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 TGM5O43548 720 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
RAB5C-205ENST00000550013 LARGE1O95461 756 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 TXKP42681 527 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 RARRES1P49788 294 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 FOSBP53539 338 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 ANGPT1Q15389 498 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 USP41Q3LFD5 358 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 WASF1Q92558 559 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 NKD2Q969F2 451 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-205ENST00000550013 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
RAB5C-205ENST00000550013 RTP3Q9BQQ7 232 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 TTC12Q9H892 705 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-205ENST00000550013 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 GPRC5CQ9NQ84 441 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 CA14Q9ULX7 337 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 ZNF292O60281 2723 aa17.1■□□□□ 0.33
RAB5C-205ENST00000550013 STK25O00506 426 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 PAPLNO95428 1278 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 GRIK3Q13003 919 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 LILRA6Q6PI73 481 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
RAB5C-205ENST00000550013 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 SLC44A3Q8N4M1 653 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 ST13P5Q8NFI4 369 aaPredicted RBP17.09■□□□□ 0.33
RAB5C-205ENST00000550013 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 PAAF1Q9BRP4 392 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.09■□□□□ 0.33
RAB5C-205ENST00000550013 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 WNT16Q9UBV4 365 aa17.09■□□□□ 0.33
RAB5C-205ENST00000550013 A0A1B0GUA9 196 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms