RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LLGL2Q6P1M3 1020 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 GPBP1Q86WP2 473 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 CEP120Q8N960 986 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 URGCPQ8TCY9 931 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 RAD54LQ92698 747 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 ZBTB45Q96K62 511 aaPredicted RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 AK8Q96MA6 479 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 REEP2Q9BRK0 252 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PAAF1Q9BRP4 392 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PANK2Q9BZ23 570 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 KMT5AQ9NQR1 393 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 ENTPD7Q9NQZ7 604 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 ARHGAP28Q9P2N2 729 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 CDH22Q9UJ99 828 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 GDAQ9Y2T3 454 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PRG3Q9Y2Y8 225 aaPredicted RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PLXNA3P51805 1871 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 TCHHQ07283 1943 aa10.78□□□□□ -0.68
HDAC7-229ENST00000549883 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
HDAC7-229ENST00000549883 C2orf71A6NGG8 1288 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 ABLIM1O14639 778 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 PTGESO14684 152 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 N4BP3O15049 544 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 RECQL4O94761 1208 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 CXCL14O95715 111 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 BMP15O95972 392 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 PPM1AP35813 382 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 OSTNP61366 133 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 KRT17Q04695 432 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 DMP1Q13316 513 aaPredicted RBP10.77□□□□□ -0.69
HDAC7-229ENST00000549883 KCNC3Q14003 757 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 SLC39A14Q15043 492 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 SEZ6Q53EL9 994 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 ATF7IP2Q5U623 682 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 TMC7Q7Z402 723 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 EFHBQ8N7U6 833 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 MRPL43Q8N983 215 aaKnown RBP10.77□□□□□ -0.69
HDAC7-229ENST00000549883 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 CNNM3Q8NE01 707 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 CALML4Q96GE6 196 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 TMEM169Q96HH4 297 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 B3GALT6Q96L58 329 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 DRC1Q96MC2 740 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.69
HDAC7-229ENST00000549883 APOL5Q9BWW9 433 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 CCSER1Q9C0I3 900 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 CDT1Q9H211 546 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 PTPRHQ9HD43 1115 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 PUF60Q9UHX1 559 aaKnown RBP10.77□□□□□ -0.69
HDAC7-229ENST00000549883 FAN1Q9Y2M0 1017 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
HDAC7-229ENST00000549883 MBTPS2O43462 519 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 EFEMP2O95967 443 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 ALDH2P05091 517 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 MAPTP10636 758 aaKnown RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 PLS3P13797 630 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 CA8P35219 290 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 OR1G1P47890 313 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 NASPP49321 788 aaPredicted RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 NDUFV1P49821 464 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 EFNA5P52803 228 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 GIT2Q14161 759 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 NAB2Q15742 525 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 GLRA4Q5JXX5 417 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 DDX53Q86TM3 631 aaKnown RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 RASSF8Q8NHQ8 419 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 FAM193BQ96PV7 902 aaPredicted RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 HAPLN2Q9GZV7 340 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 IKZF4Q9H2S9 585 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 ZSCAN16Q9H4T2 348 aaPredicted RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
HDAC7-229ENST00000549883 TNFSF13BQ9Y275 285 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 PHLPP2Q6ZVD8 1323 aa10.76□□□□□ -0.69
HDAC7-229ENST00000549883 CASTOR2A6NHX0 329 aa10.75□□□□□ -0.69
HDAC7-229ENST00000549883 TNFRSF10AO00220 468 aa10.75□□□□□ -0.69
HDAC7-229ENST00000549883 CLASP2O75122 1294 aaKnown RBP10.75□□□□□ -0.69
HDAC7-229ENST00000549883 F13A1P00488 732 aa10.75□□□□□ -0.69
HDAC7-229ENST00000549883 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
HDAC7-229ENST00000549883 ZSCAN22P10073 491 aaPredicted RBP10.75□□□□□ -0.69
HDAC7-229ENST00000549883 HARSP12081 509 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms