RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 PRG3Q9Y2Y8 225 aaPredicted RBP9.39□□□□□ -0.91
SMARCD1-207ENST00000549526 URB1O60287 2271 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-207ENST00000549526 COL1A2P08123 1366 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 BCLAF3A2AJT9 711 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 BACH1O14867 736 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 ATXN7O15265 892 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 MAFGO15525 162 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 POMCP01189 267 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 FGAP02671 866 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 GSPT1P15170 499 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 GDI1P31150 447 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 KCNC4Q03721 635 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 ALX1Q15699 326 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 ELF2Q15723 593 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 PLK5Q496M5 336 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 PABPC1LQ4VXU2 614 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 CCDC178Q5BJE1 867 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 TWF2Q6IBS0 349 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 USP17L6PQ6QN14 398 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 B3GALT6Q96L58 329 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 PIGSQ96S52 555 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 SDF4Q9BRK5 362 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 DUSP15Q9H1R2 295 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 CHST12Q9NRB3 414 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 GDE1Q9NZC3 331 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 KCNH3Q9ULD8 1083 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 SPTA1P02549 2419 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 TEP1Q99973 2627 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
SMARCD1-207ENST00000549526 ZBTB42B2RXF5 422 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 EXTL3O43909 919 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 AKAP3O75969 853 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 C22orf31O95567 290 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 TMOD1P28289 359 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 OR1G1P47890 313 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 IRX4P78413 519 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 DGKKQ5KSL6 1271 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 CKAP2LQ8IYA6 745 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 PGBD4Q96DM1 585 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 MAP7D2Q96T17 732 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 ZFP14Q9HCL3 533 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 TRPV5Q9NQA5 729 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 FNIP2Q9P278 1114 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 KANSL3Q9P2N6 904 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 DNMT3BQ9UBC3 853 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 MYH9P35579 1960 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 PLXNB3Q9ULL4 1909 aa9.37□□□□□ -0.91
SMARCD1-207ENST00000549526 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 CCDC163A0A0D9SF12 145 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 PNMA6FA0A0J9YX94 578 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 CAPN9O14815 690 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 C8AP07357 584 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 PCP11498 1178 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 DARSP14868 501 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 CLCN3P51790 818 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 ZNF423Q2M1K9 1284 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 FAM160B1Q5W0V3 765 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 RAB44Q7Z6P3 723 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 ZSCAN10Q96SZ4 725 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 RNF41Q9H4P4 317 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 FAM105AQ9NUU6 356 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 MARCH5Q9NX47 278 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 UBIAD1Q9Y5Z9 338 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 APC2O95996 2303 aa9.36□□□□□ -0.91
SMARCD1-207ENST00000549526 PATE3B3GLJ2 98 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 B4E1Z4 1266 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 ZNF213O14771 459 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 ZNF263O14978 683 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 MEFVO15553 781 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 ATG7O95352 703 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 NTRK1P04629 796 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 NEFLP07196 543 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 COL4A2P08572 1712 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 PSMC3P17980 439 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 MAPK8P45983 427 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 KPNA1P52294 538 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 CREMQ03060 361 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 CACNA1EQ15878 2313 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 USP41Q3LFD5 358 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 C1orf228Q6PIY5 440 aa9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 CCNI2Q6ZMN8 369 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-207ENST00000549526 TBC1D10CQ8IV04 446 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms