RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CCDC43Q96MW1 224 aaKnown RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 CNTNAP2Q9UHC6 1331 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ERLIN1O75477 346 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 CHRNB2P17787 502 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PLA2G4AP47712 749 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 MFAP3P55082 362 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 GABPB1Q06547 395 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 NNTQ13423 1086 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PRPF4BQ13523 1007 aaKnown RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ATP8B4Q8TF62 1192 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 KREMEN1Q96MU8 473 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PACSIN1Q9BY11 444 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 FAM124BQ9H5Z6 455 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 SEPT9Q9UHD8 586 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 TISP43B9A030 160 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 FOXN3O00409 490 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ENC1O14682 589 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 GRIN3BO60391 1043 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 IGHA2P01877 340 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 AARSP49588 968 aaKnown RBP eCLIP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PPP1R2P3Q6NXS1 205 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 GJB7Q6PEY0 223 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 CBWD2Q8IUF1 395 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 RHOT2Q8IXI1 618 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 FBXL13Q8NEE6 735 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 COG1Q8WTW3 980 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 SEMA4DQ92854 862 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 PUF60Q9UHX1 559 aaKnown RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF233A6NK53 670 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 STRNO43815 780 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 KIF4AO95239 1232 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 CYP1A2P05177 515 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 GCLCP48506 637 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 STAT5BP51692 787 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 MXD4Q14582 209 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 LONRF2Q1L5Z9 754 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 CFAP221Q4G0U5 840 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-206ENST00000549505 GADL1Q6ZQY3 521 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 NT5DC3Q86UY8 548 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 HAPLN2Q9GZV7 340 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 RAB20Q9NX57 234 aa10.8□□□□□ -0.68
RAB5B-206ENST00000549505 ASAP2O43150 1006 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 RTN2O75298 545 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 GALCP54803 685 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 MCL1Q07820 350 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 Q3C1V9 767 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 CCNI2Q6ZMN8 369 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-206ENST00000549505 ZSWIM2Q8NEG5 633 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 SEC14L1Q92503 715 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 MMP19Q99542 508 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 C2orf40Q9H1Z8 148 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 MSCO60682 206 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 SASH3O75995 380 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-206ENST00000549505 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
RAB5B-206ENST00000549505 SLC7A3Q8WY07 619 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 CGRRF1Q99675 332 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
RAB5B-206ENST00000549505 SRGAP2O75044 1071 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 ARIH2O95376 493 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CETPP11597 493 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 POLGP54098 1239 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 VSNL1P62760 191 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CAPSQ13938 189 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 PLS1Q14651 629 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 TAPT1Q6NXT6 567 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 SV2AQ7L0J3 742 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 HDXQ7Z353 690 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 FZD8Q9H461 694 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 PCIF1Q9H4Z3 704 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CCDC169A6NNP5 214 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 DDX3YO15523 660 aaKnown RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 TCF7P36402 384 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 GTF2A2P52657 109 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CDR2Q01850 454 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 PLCB4Q15147 1175 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 SURF1Q15526 300 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 NFRKBQ6P4R8 1299 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 TSHZ1Q6ZSZ6 1077 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 USP38Q8NB14 1042 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 UBE2TQ9NPD8 197 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF185O15231 689 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 GGPS1O95749 300 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 ACO1P21399 889 aaKnown RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 GCLMP48507 274 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF132P52740 706 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms