RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 WDR92Q96MX6 357 aa6.4□□□□□ -1.38
UBE2N-202ENST00000548946 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-202ENST00000548946 PCED1AQ9H1Q7 454 aa6.4□□□□□ -1.38
UBE2N-202ENST00000548946 C14orf93Q9H972 538 aaKnown RBP6.4□□□□□ -1.38
UBE2N-202ENST00000548946 SMC4Q9NTJ3 1288 aa6.4□□□□□ -1.38
UBE2N-202ENST00000548946 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-202ENST00000548946 IFT57Q9NWB7 429 aa6.4□□□□□ -1.38
UBE2N-202ENST00000548946 NSD2O96028 1365 aa6.4□□□□□ -1.39
UBE2N-202ENST00000548946 ABCC11Q96J66 1382 aa6.4□□□□□ -1.39
UBE2N-202ENST00000548946 CD109Q6YHK3 1445 aa6.4□□□□□ -1.39
UBE2N-202ENST00000548946 ZFYVE16Q7Z3T8 1539 aa6.4□□□□□ -1.39
UBE2N-202ENST00000548946 IFT172Q9UG01 1749 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 C2orf78A6NCI8 922 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 DAPK3O43293 454 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 GAS7O60861 476 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 STAT3P40763 770 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 TMPOP42166 694 aaKnown RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 CALD1Q05682 793 aaKnown RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 ADCY2Q08462 1091 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 TCIRG1Q13488 830 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 KLHL40Q2TBA0 621 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 KIF18BQ86Y91 864 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 PHYKPLQ8IUZ5 450 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 C7orf31Q8N865 590 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 ANKRD53Q8N9V6 530 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 IL17DQ8TAD2 202 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 NKD2Q969F2 451 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 PDLIM2Q96JY6 352 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 RPL10LQ96L21 214 aaKnown RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 ORAI3Q9BRQ5 295 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 KIF16BQ96L93 1317 aa6.39□□□□□ -1.39
UBE2N-202ENST00000548946 COL3A1P02461 1466 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 ZC3H13Q5T200 1668 aaKnown RBP6.39□□□□□ -1.39
UBE2N-202ENST00000548946 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ZNF202O95125 648 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 U2AF1L5P0DN76 240 aaPredicted RBP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 MCM7P33993 719 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 TNNT2P45379 298 aaPredicted RBP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 NEK4P51957 841 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 U2AF1Q01081 240 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 CRHR2Q13324 411 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 SAFB2Q14151 953 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ALDH1L2Q3SY69 923 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 KRT40Q6A162 431 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 PASD1Q8IV76 773 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ITPRIPQ8IWB1 547 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 PLA2G15Q8NCC3 412 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 TOMM22Q9NS69 142 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 OXSMQ9NWU1 459 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 PIK3R4Q99570 1358 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 FANCAO15360 1455 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ARAP3Q8WWN8 1544 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 ADGRB1O14514 1584 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 CFAP74Q9C0B2 1584 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 INO80Q9ULG1 1556 aaPredicted RBP6.38□□□□□ -1.39
UBE2N-202ENST00000548946 MROH1Q8NDA8 1641 aa6.38□□□□□ -1.39
UBE2N-202ENST00000548946 UGGT1Q9NYU2 1555 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 MED14O60244 1454 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 PPIP5K1Q6PFW1 1433 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 ANKRD36BQ8N2N9 1353 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 PRPF6O94906 941 aaKnown RBP6.37□□□□□ -1.39
UBE2N-202ENST00000548946 DGCR2P98153 550 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 KLF10Q13118 480 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 MYBPC3Q14896 1274 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 ACAP1Q15027 740 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 FAM111BQ6SJ93 734 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 GAREM2Q75VX8 874 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 CLEC14AQ86T13 490 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 AFAP1Q8N556 730 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 APPBP2Q92624 585 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 GCC1Q96CN9 775 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 RNPC3Q96LT9 517 aaKnown RBP6.37□□□□□ -1.39
UBE2N-202ENST00000548946 MAP7D2Q96T17 732 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 GPHA2Q96T91 129 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 ZNF703Q9H7S9 590 aaPredicted RBP6.37□□□□□ -1.39
UBE2N-202ENST00000548946 LMBRD1Q9NUN5 540 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 PARPBPQ9NWS1 579 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 DNAI1Q9UI46 699 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 PRDM4Q9UKN5 801 aa6.37□□□□□ -1.39
UBE2N-202ENST00000548946 NOL7Q9UMY1 257 aaKnown RBP6.37□□□□□ -1.39
UBE2N-202ENST00000548946 REREQ9P2R6 1566 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 ADGRB3O60242 1522 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 LMTK2Q8IWU2 1503 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 UHRF1BP1LA0JNW5 1464 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 UBE2QL1A1L167 161 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 SUV39H1O43463 412 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 KPNA6O60684 536 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 APOL3O95236 402 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 F2P00734 622 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 JUNP05412 331 aaKnown RBP6.36□□□□□ -1.39
UBE2N-202ENST00000548946 C1SP09871 688 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 VSIG10L2P0DP72 767 aa6.36□□□□□ -1.39
UBE2N-202ENST00000548946 TUBA3CQ13748 450 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms