RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PARVGQ9HBI0 331 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 SNTG2Q9NY99 539 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 LARSQ9P2J5 1176 aaKnown RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 KANSL3Q9P2N6 904 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 INPPL1O15357 1258 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 RECQL4O94761 1208 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 DDHD2O94830 711 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 HARSP12081 509 aaKnown RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 SLC11A1P49279 550 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ZNF131P52739 623 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 NCKAP1LP55160 1127 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 KRT17Q04695 432 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 PLPP4Q5VZY2 271 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 SHC4Q6S5L8 630 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 BCL7CQ8WUZ0 217 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ATXN2LQ8WWM7 1075 aaKnown RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 TMEM169Q96HH4 297 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ACO2Q99798 780 aaKnown RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 TCF25Q9BQ70 676 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 CDT1Q9H211 546 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 UBE2ZQ9H832 354 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ANKFY1Q9P2R3 1169 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
RAB5C-204ENST00000547517 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 COG5Q9UP83 839 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
RAB5C-204ENST00000547517 ZMYM2Q9UBW7 1377 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 H0YCG3 227 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 GALTP07902 379 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 KCNA5P22460 613 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 CA8P35219 290 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB5C-204ENST00000547517 ERVFC1P60507 584 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 MRPS5P82675 430 aaKnown RBP12.98□□□□□ -0.33
RAB5C-204ENST00000547517 HYAL1Q12794 435 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 GRIK3Q13003 919 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-204ENST00000547517 ZBTB33Q86T24 672 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 DDX12PQ92771 950 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 DHX58Q96C10 678 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 BICD1Q96G01 975 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 TMEM175Q9BSA9 504 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
RAB5C-204ENST00000547517 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
RAB5C-204ENST00000547517 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-204ENST00000547517 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 MYMKA6NI61 221 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 FSCN2O14926 492 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 TRAK2O60296 914 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 OR1G1P47890 313 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 NRIP1P48552 1158 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 KCNQ1P51787 676 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 OSTNP61366 133 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 KRT85P78386 507 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 AAK1Q2M2I8 961 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 TJAP1Q5JTD0 557 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-204ENST00000547517 MPZL3Q6UWV2 235 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 RBM23Q86U06 439 aaKnown RBP12.97□□□□□ -0.33
RAB5C-204ENST00000547517 SFR1Q86XK3 245 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 CEP120Q8N960 986 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
RAB5C-204ENST00000547517 ASB2Q96Q27 587 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 TCHPQ9BT92 498 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 CLDND1Q9NY35 253 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
RAB5C-204ENST00000547517 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
RAB5C-204ENST00000547517 MYO7AQ13402 2215 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 VCANP13611 3396 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 ABLIM1O14639 778 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 PTGESO14684 152 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 NRP1O14786 923 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 LINC01565O15544 149 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 TOM1L1O75674 476 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 MCF2P10911 925 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 PROZP22891 400 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 NMT1P30419 496 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms