RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 BHMG1C9JSJ3 638 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 KIAA0391O15091 583 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 HARSP12081 509 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CDK7P50613 346 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 HPCAP84074 193 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 OCRLQ01968 901 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 MTMR2Q13614 643 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 NONOQ15233 471 aaKnown RBP eCLIP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 SEC23AQ15436 765 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 C4orf33Q8N1A6 199 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 TXLNGYQ9BZA5 131 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 ATRNO75882 1429 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 POC1B-GALNT4F8VUJ3 575 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 ADCY3O60266 1144 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 RNASEH1O60930 286 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 PDE5AO76074 875 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 KRT15P19012 456 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 AMPD1P23109 780 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 DSG1Q02413 1049 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 MIPEPQ99797 713 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 CDC42EP4Q9H3Q1 356 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 SYNCQ9H7C4 482 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 KRT82Q9NSB4 513 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 TMEM2Q9UHN6 1383 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 NAGPAQ9UK23 515 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 MYH2Q9UKX2 1941 aa12.73□□□□□ -0.37
RBFOX1-208ENST00000547372 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ATP5DP30049 168 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 AP1B1Q10567 949 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 KLC3Q6P597 504 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ZDHHC24Q6UX98 284 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ZCRB1Q8TBF4 217 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PIP4K2CQ8TBX8 421 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 TSC22D4Q9Y3Q8 395 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SIGLEC16A6NMB1 481 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SPOPO43791 374 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ESRRAP11474 423 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ATF3P18847 181 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SLC9A1P19634 815 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 NFKBIAP25963 317 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PGM1P36871 562 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 MAPK7Q13164 816 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 CCDC137Q6PK04 289 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 NLRP9Q7RTR0 991 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SEC14L1Q92503 715 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SYN2Q92777 582 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 INPP5DQ92835 1189 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 ANKRD63C9JTQ0 380 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PDLIM1O00151 329 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 NOL4O94818 638 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 FKBP3Q00688 224 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 RINLQ6ZS11 566 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 C9orf72Q96LT7 481 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 UBAP1Q9NZ09 502 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
RBFOX1-208ENST00000547372 CCDC22O60826 627 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 ZBED4O75132 1171 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 MED21Q13503 144 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 CALCRLQ16602 461 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 C7orf25Q9BPX7 421 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 FAM205AQ6ZU69 1335 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 TNFAIP3P21580 790 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 GNA11P29992 359 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 CTSWP56202 376 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 PTENP60484 403 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 CLPTM1LQ96KA5 538 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms