RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KRT19P08727 400 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 PIK3CAP42336 1068 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 VPS41P49754 854 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ATP1A2P50993 1020 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ALDH5A1P51649 535 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-209ENST00000547018 KRT39Q6A163 491 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 OR2W6PQ8NHA6 318 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 KRT35Q92764 455 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 TRIM51Q9BSJ1 452 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 COG5Q9UP83 839 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 ZNF233A6NK53 670 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 DGAT1O75907 488 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 ARIH2O95376 493 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 KRT14P02533 472 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.21
SCAF11-209ENST00000547018 SNX1Q13596 522 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 KCTD2Q14681 263 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 PPP2R5AQ15172 486 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.21
SCAF11-209ENST00000547018 OPTNQ96CV9 577 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
SCAF11-209ENST00000547018 AGO2Q9UKV8 859 aaKnown RBP13.71□□□□□ -0.21
SCAF11-209ENST00000547018 COL2A1P02458 1487 aaPredicted RBP13.71□□□□□ -0.21
SCAF11-209ENST00000547018 SLC26A4O43511 780 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.22
SCAF11-209ENST00000547018 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.22
SCAF11-209ENST00000547018 XKR3Q5GH77 459 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 TMEM270Q6UE05 265 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.22
SCAF11-209ENST00000547018 FBXL13Q8NEE6 735 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 KIFAP3Q92845 792 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.22
SCAF11-209ENST00000547018 TTI1O43156 1089 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
SCAF11-209ENST00000547018 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.228e-7■□□□□ 10.9
SCAF11-209ENST00000547018 TNFSF9P41273 254 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 CLCN3P51790 818 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 TMEM62Q0P6H9 643 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 CEP89Q96ST8 783 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 PORCNQ9H237 461 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 OATP04181 439 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 GPD1LQ8N335 351 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 CEP120Q8N960 986 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 SPATA33Q96N06 139 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
SCAF11-209ENST00000547018 NXF1Q9UBU9 619 aaKnown RBP13.7□□□□□ -0.22
SCAF11-209ENST00000547018 ZNF112Q9UJU3 913 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 ALG6Q9Y672 507 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 DAPK3O43293 454 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 GLRA2P23416 452 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 KCNJ1P48048 391 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 ACBD3Q9H3P7 528 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
SCAF11-209ENST00000547018 DNAJC17Q9NVM6 304 aaKnown RBP13.7□□□□□ -0.22
SCAF11-209ENST00000547018 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
SCAF11-209ENST00000547018 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 CFHP08603 1231 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 PDE6CP51160 858 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 MFAP3P55082 362 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 TAS1R3Q7RTX0 852 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 USP38Q8NB14 1042 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 LMO3Q8TAP4 145 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 IWS1Q96ST2 819 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 HEMGNQ9BXL5 484 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 PCDHB4Q9Y5E5 795 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 KIAA1217Q5T5P2 1943 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 PGRMC1O00264 195 aaKnown RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 MAP2K7O14733 419 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 HPDP32754 393 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 TNNC1P63316 161 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 GABPB1Q06547 395 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 CCDC25Q86WR0 208 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms