RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TRIM48Q8IWZ4 208 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 CKAP2LQ8IYA6 745 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 LRRC47Q8N1G4 583 aaKnown RBP8.33□□□□□ -1.08
CHPT1-203ENST00000546873 ANKRD31Q8N7Z5 1873 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 BORCS6Q96GS4 357 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 CLIC6Q96NY7 704 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 SMOC1Q9H4F8 434 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 DTLQ9NZJ0 730 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 MYOTQ9UBF9 498 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 CNOT11Q9UKZ1 510 aaKnown RBP8.33□□□□□ -1.08
CHPT1-203ENST00000546873 A0A1B0GUL6 1792 aa8.33□□□□□ -1.08
CHPT1-203ENST00000546873 K7ESM1 405 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 PRODHO43272 600 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 ZFYP08048 801 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-203ENST00000546873 UQCRFS1P1P0C7P4 283 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-203ENST00000546873 ST5P78524 1137 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 RAB33AQ14088 237 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 TTF1Q15361 905 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-203ENST00000546873 SPATS1Q496A3 300 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 EMC4Q5J8M3 183 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 PRAMEF18Q5VWM3 479 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 CNBD1Q8NA66 436 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 KBTBD3Q8NAB2 608 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 DCAF4Q8WV16 495 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 LPIN2Q92539 896 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 PUS3Q9BZE2 481 aaKnown RBP8.32□□□□□ -1.08
CHPT1-203ENST00000546873 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.32□□□□□ -1.08
CHPT1-203ENST00000546873 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
CHPT1-203ENST00000546873 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 MYH7P12883 1935 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 TCRBV5S2A0A599 114 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 GOLIM4O00461 696 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 DLX3O60479 287 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 TADA3O75528 432 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 PDE8BO95263 885 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 CAPNS1P04632 268 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 EPS15P42566 896 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 CR1LQ2VPA4 569 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 NSMFQ6X4W1 530 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 DBX2Q6ZNG2 339 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
CHPT1-203ENST00000546873 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 ARRDC4Q8NCT1 418 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 RIPOR2Q9Y4F9 1068 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 DUOX1Q9NRD9 1551 aa8.31□□□□□ -1.08
CHPT1-203ENST00000546873 TRAV20A0A0B4J274 112 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 CELF2O95319 508 aaKnown RBP8.3□□□□□ -1.08
CHPT1-203ENST00000546873 FGFR1P11362 822 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 HSPA4P34932 840 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 IFRD2Q12894 506 aaPredicted RBP8.3□□□□□ -1.08
CHPT1-203ENST00000546873 SF3B3Q15393 1217 aaKnown RBP8.3□□□□□ -1.08
CHPT1-203ENST00000546873 LGI4Q8N135 537 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 TMEM209Q96SK2 561 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 ZFYVE21Q9BQ24 234 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 SYT3Q9BQG1 590 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 BRIP1Q9BX63 1249 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
CHPT1-203ENST00000546873 HMG20BQ9P0W2 317 aa8.3□□□□□ -1.08
CHPT1-203ENST00000546873 A0A0D9SFI3 127 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 MROH6A6NGR9 719 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 FZD9O00144 591 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 DDX3XO00571 662 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 CYP1A1P04798 512 aaPredicted RBP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 ADRB1P08588 477 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 ADORA1P30542 326 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 TIMM10P62072 90 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 SPIRE1Q08AE8 756 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 KRT32Q14532 448 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 KIZQ2M2Z5 673 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 SLC10A5Q5PT55 438 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 MCTP2Q6DN12 878 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 LCORQ96JN0 433 aaPredicted RBP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 ANKRD2Q9GZV1 360 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 LSG1Q9H089 658 aaKnown RBP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 SLKQ9H2G2 1235 aaPredicted RBP8.29□□□□□ -1.08
CHPT1-203ENST00000546873 L2HGDHQ9H9P8 463 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 MAST2Q6P0Q8 1798 aa8.29□□□□□ -1.08
CHPT1-203ENST00000546873 CACNA1SQ13698 1873 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 COL4A5P29400 1685 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 SRGNP10124 158 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 PABPC1P11940 636 aaKnown RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 PSMA5P28066 241 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 CHRNDQ07001 517 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 MCMDC2Q4G0Z9 681 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 CAVIN4Q5BKX8 364 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 STYK1Q6J9G0 422 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms