RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 NACC1Q96RE7 527 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 EIF2AK1Q9BQI3 630 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SENP6Q9GZR1 1112 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SCAND2PQ9GZW5 306 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 TUFT1Q9NNX1 390 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 RGL1Q9NZL6 768 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 WRAP73Q9P2S5 460 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SRPRBQ9Y5M8 271 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 COL1A2P08123 1366 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 TMEM150BA6NC51 233 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 ARVCFO00192 962 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PQBP1O60828 265 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CUTAO60888 179 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 MED24O75448 989 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 RPA1P27694 616 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CDC25AP30304 524 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CCT6AP40227 531 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 RTP1P59025 263 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 RAC1P63000 192 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PTPN11Q06124 597 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CTTNQ14247 550 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PDIA5Q14554 519 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 GRIK4Q16099 956 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 LRRC26Q2I0M4 334 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 TRIM60Q495X7 471 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PLA2G4FQ68DD2 849 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CABP7Q86V35 215 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 FAM126BQ8IXS8 530 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 C4orf19Q8IY42 314 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 SLC43A3Q8NBI5 491 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 RASSF8Q8NHQ8 419 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 PPP1R13LQ8WUF5 828 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 LMBR1Q8WVP7 490 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 TNPO1Q92973 898 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CDK5RAP3Q96JB5 506 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CCDC43Q96MW1 224 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CLIC6Q96NY7 704 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 HSD17B14Q9BPX1 270 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 MMTAG2Q9BU76 263 aaKnown RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 POLR3CQ9BUI4 534 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-211ENST00000546304 SEZ6LQ9BYH1 1024 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 CSRNP2Q9H175 543 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 RNPEPQ9H4A4 650 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 ZSWIM4Q9H7M6 989 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 GTF2IRD1Q9UHL9 959 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 TUBE1Q9UJT0 475 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 SCN5AQ14524 2016 aa7.06□□□□□ -1.28
PRKDC-211ENST00000546304 NRCAMQ92823 1304 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 C17orf102A2RUQ5 167 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SLC26A4O43511 780 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 HBP1O60381 514 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 B4GALT4O60513 344 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 LYPLA2O95372 231 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 INSRRP14616 1297 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 MUTP22033 750 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 YWHABP31946 246 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 UBA7P41226 1012 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 IGBP1P78318 339 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SUZ12Q15022 739 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 KARSQ15046 597 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 ZRSR1Q15695 479 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 MTERF2Q49AM1 385 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TMEM119Q4V9L6 283 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 XKR3Q5GH77 459 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SPECC1Q5M775 1068 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 HYIQ5T013 277 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 GDF6Q6KF10 455 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SLC39A5Q6ZMH5 540 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 ANO5Q75V66 913 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TRMT1LQ7Z2T5 733 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 ANKRD33Q7Z3H0 272 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 CATSPER3Q86XQ3 398 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TPH2Q8IWU9 490 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TRAPPC12Q8WVT3 735 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 HTATIP2Q9BUP3 242 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 CCSER1Q9C0I3 900 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 NT5C3AQ9H0P0 336 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TRMT13Q9NUP7 481 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 DDX19AQ9NUU7 478 aaKnown RBP7.05□□□□□ -1.28
PRKDC-211ENST00000546304 SETD4Q9NVD3 440 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 HDAC6Q9UBN7 1215 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 RCOR1Q9UKL0 485 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
PRKDC-211ENST00000546304 TET1Q8NFU7 2136 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 MBLAC1A4D2B0 266 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CARNS1A5YM72 827 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 RRN3P2A6NIE6 340 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TLR3O15455 904 aaKnown RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 SLITRK3O94933 977 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms