RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CALN1Q9BXU9 219 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 TRIM7Q9C029 511 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 TMEM117Q9H0C3 514 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 APEX2Q9UBZ4 518 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 hCG_1984214I3L0E3 225 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 GRAP2O75791 330 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 GAP43P17677 238 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 SLC12A3P55017 1021 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF844Q08AG5 666 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 KYNUQ16719 465 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 QPCTQ16769 361 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 PARP9Q8IXQ6 854 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 LRRC71Q8N4P6 559 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF713Q8N859 430 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 TAS1R2Q8TE23 839 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 RAPGEF5Q92565 580 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 NAP1L3Q99457 506 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 NYAP2Q9P242 653 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ADAMTS7Q9UKP4 1686 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ESYT2A0FGR8 921 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 K7ERI5 159 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 M0R2N6 131 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 SGK1O00141 431 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 RASGRF2O14827 1237 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ATP9AO75110 1047 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ASNSP08243 561 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 KRT10P13645 584 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 HSPA9P38646 679 aaKnown RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 KIAA1755Q5JYT7 1200 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 AP1ARQ63HQ0 302 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 HHIPL2Q6UWX4 724 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ARHGAP27Q6ZUM4 889 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 RFX8Q6ZV50 586 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 FRMD5Q7Z6J6 570 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 VSIG1Q86XK7 387 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 NKIRAS1Q9NYS0 192 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 IKBKGQ9Y6K9 419 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ASTN2O75129 1339 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 WEE2P0C1S8 567 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 DPEP1P16444 411 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 MFAP3P55082 362 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 SNRNP35Q16560 246 aaKnown RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 CYB5D1Q6P9G0 228 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF449Q6P9G9 518 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 NEK9Q8TD19 979 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ZBTB10Q96DT7 871 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 ZBTB45Q96K62 511 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-203ENST00000546084 DISP2A7MBM2 1401 aa10.48□□□□□ -0.73
TRAF1-203ENST00000546084 CAND2O75155 1236 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 LCA5LO95447 670 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 GPC5P78333 572 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 PPP3CAQ08209 521 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TMEM119Q4V9L6 283 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 USP37Q86T82 979 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ANKMY2Q8IV38 441 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 KIF2BQ8N4N8 673 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 CCDC197Q8NCU1 140 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 RFFLQ8WZ73 363 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 SEMA4AQ9H3S1 761 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ACTR5Q9H9F9 607 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 PCDHGC5Q9Y5F6 944 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 LRP6O75581 1613 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TNFRSF8P28908 595 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF131P52739 623 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TRAF1Q13077 416 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 PRMT1Q99873 361 aaKnown RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ADAM22Q9P0K1 906 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 EXOC7Q9UPT5 735 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 PRRC2BQ5JSZ5 2229 aaKnown RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ECEL1O95672 775 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 P4HBP07237 508 aaKnown RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 SETSIPP0DME0 302 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ATF2P15336 505 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ADRA2BP18089 450 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 CNGA1P29973 690 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 IFRD2Q12894 506 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 DACT2Q5SW24 774 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 NBPF12Q5TAG4 269 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 CASC4Q6P4E1 433 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF572Q7Z3I7 529 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 MSTO1Q9BUK6 570 aa10.47□□□□□ -0.73
TRAF1-203ENST00000546084 WRAP73Q9P2S5 460 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-203ENST00000546084 STRCP1A6NGW2 1772 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 F8VZ95 297 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms