RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 COBLL1Q53SF7 1204 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 SLC24A5Q71RS6 500 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 CCDC47Q96A33 483 aaKnown RBP17.83■□□□□ 0.44
LIMS2-217ENST00000545738 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 N4BP3O15049 544 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 CLIC2O15247 247 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 PTMSP20962 102 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 SCP2P22307 547 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIMS2-217ENST00000545738 TMEM132AQ24JP5 1023 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 AGMOQ6ZNB7 445 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 SYCP3Q8IZU3 236 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 TRIML1Q8N9V2 468 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 GBP3Q9H0R5 595 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 TMEM206Q9H813 350 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 ANK1P16157 1881 aa17.82■□□□□ 0.44
LIMS2-217ENST00000545738 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-217ENST00000545738 GRXCR1A8MXD5 290 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 FGFR1P11362 822 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 AKAP5P24588 427 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 BMP8BP34820 402 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 OSTNP61366 133 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 CRELD2Q6UXH1 353 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-217ENST00000545738 TOP1MTQ969P6 601 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 EEF2KMTQ96G04 330 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 SYCE3A1L190 88 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 CLDN3O15551 220 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 ZNF623O75123 536 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 UPP2O95045 317 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 ACTN1P12814 892 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 WNT7BP56706 349 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 CLLU1OSQ5K130 101 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 KLHL10Q6JEL2 608 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 STXBP4Q6ZWJ1 553 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 MRPL10Q7Z7H8 261 aaKnown RBP17.81■□□□□ 0.44
LIMS2-217ENST00000545738 THNSL1Q8IYQ7 743 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 RNF169Q8NCN4 708 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 RNPC3Q96LT9 517 aaKnown RBP17.81■□□□□ 0.44
LIMS2-217ENST00000545738 TCHPQ9BT92 498 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 FUCA2Q9BTY2 467 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 RC3H2Q9HBD1 1191 aaKnown RBP17.81■□□□□ 0.44
LIMS2-217ENST00000545738 C1orf112Q9NSG2 853 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
LIMS2-217ENST00000545738 CITO14578 2027 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 ABCD1P33897 745 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 NLRP12P59046 1061 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 NCBP1Q09161 790 aaKnown RBP17.8■□□□□ 0.44
LIMS2-217ENST00000545738 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 TMEM130Q8N3G9 435 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 POMGNT1Q8WZA1 660 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 TYW1Q9NV66 732 aaKnown RBP17.8■□□□□ 0.44
LIMS2-217ENST00000545738 HCSTQ9UBK5 93 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 EXOC7Q9UPT5 735 aa17.8■□□□□ 0.44
LIMS2-217ENST00000545738 EYSQ5T1H1 3165 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 MCF2P10911 925 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 ACOT2P49753 483 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 SKOR2Q2VWA4 1001 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-217ENST00000545738 ZSCAN23Q3MJ62 389 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 ANKRD40Q6AI12 368 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-217ENST00000545738 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 ZFP42Q96MM3 310 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 MSTO1Q9BUK6 570 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-217ENST00000545738 TMEM161AQ9NX61 479 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 PLAGL2Q9UPG8 496 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 CTNND2Q9UQB3 1225 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 TRAF3IP3Q9Y228 551 aa17.79■□□□□ 0.44
LIMS2-217ENST00000545738 PDXKO00764 312 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 RECQL4O94761 1208 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 STAG3L1P0CL83 205 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 STX17P56962 302 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 DCAF4L1Q3SXM0 396 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 FAM84AQ96KN4 292 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 ADPGKQ9BRR6 497 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 DMAC2Q9NW81 257 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 HSPBP1Q9NZL4 362 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 KLK14Q9P0G3 267 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 AGO2Q9UKV8 859 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 COLQQ9Y215 455 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 SLC4A7Q9Y6M7 1214 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 PDCD11Q14690 1871 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 B4GALT3O60512 393 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 EFCAB14O75071 495 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 ARHGEF15O94989 841 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 GJB5O95377 273 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 AMHP03971 560 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 CXCL8P10145 99 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 GARTP22102 1010 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 GRM5P41594 1212 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 MATR3P43243 847 aaKnown RBP eCLIP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 KCNJ6P48051 423 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms