RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 PCDHA11Q9Y5I1 949 aa3.99□□□□□ -1.77
LINC01965-204ENST00000545549 SRPRBQ9Y5M8 271 aaKnown RBP3.99□□□□□ -1.77
LINC01965-204ENST00000545549 RAI2Q9Y5P3 530 aa3.99□□□□□ -1.77
LINC01965-204ENST00000545549 C2CD3Q4AC94 2353 aa3.99□□□□□ -1.77
LINC01965-204ENST00000545549 MYO7AQ13402 2215 aa3.99□□□□□ -1.77
LINC01965-204ENST00000545549 GRIN2DO15399 1336 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SYNRGQ9UMZ2 1314 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CEP295Q9C0D2 2601 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MYH6P13533 1939 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 FAM237AA0A1B0GTK4 181 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CCDC194A0A1B0GVG4 234 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 BICDL2A1A5D9 508 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 BTBD18B2RXH4 712 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 LAD1O00515 517 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MEIS2O14770 477 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 KHNYNO15037 678 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ADAMTS3O15072 1205 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 AP5Z1O43299 807 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ATP8B1O43520 1251 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MARCH6O60337 910 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ZBED4O75132 1171 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 EIF3JO75822 258 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 URI1O94763 535 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GOLGA8HP0CJ92 632 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MAPTP10636 758 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CD33P20138 364 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CDC27P30260 824 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 HOXC8P31273 242 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 LONP1P36776 959 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GJA9P57773 515 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SNAP25P60880 206 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ETF1P62495 437 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CBX1P83916 185 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CTBSQ01459 385 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 TNP2Q05952 138 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GABPB1Q06547 395 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GRB10Q13322 594 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PPIGQ13427 754 aaKnown RBP eCLIP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PNOCQ13519 176 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 BAATQ14032 418 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 LBRQ14739 615 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ARHGAP29Q52LW3 1261 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 TTC38Q5R3I4 469 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 COX20Q5RI15 118 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PRAMEF19Q5SWL8 479 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 AXDND1Q5T1B0 1012 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 TMEM63BQ5T3F8 832 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SPATA1Q5VX52 437 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ARL6IP4Q66PJ3 421 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ISM2Q6H9L7 571 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 IQCEQ6IPM2 695 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SHC4Q6S5L8 630 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SLC30A10Q6XR72 485 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SYT10Q6XYQ8 523 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 TMTC3Q6ZXV5 915 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 NLRP8Q86W28 1048 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 VSTM4Q8IW00 320 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SAMD3Q8N6K7 520 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GOLGA6L1Q8N7Z2 621 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CEP112Q8N8E3 955 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SYTL5Q8TDW5 730 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 NOC3LQ8WTT2 800 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ANKRD7Q92527 254 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 DHX58Q96C10 678 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 IQCDQ96DY2 449 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 BBC3Q96PG8 261 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MYL10Q9BUA6 226 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 UBA5Q9GZZ9 404 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 GBP3Q9H0R5 595 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ABHD16BQ9H3Z7 469 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CUEDC2Q9H467 287 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 CLMPQ9H6B4 373 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 ACAD9Q9H845 621 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MAGEF1Q9HAY2 307 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 LUC7LQ9NQ29 371 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 SH3GLB2Q9NR46 395 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 RNF146Q9NTX7 359 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 FANCLQ9NW38 375 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MAP3K20Q9NYL2 800 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 DDX20Q9UHI6 824 aaKnown RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 DNAI1Q9UI46 699 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PHF24Q9UPV7 400 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 NFE2L3Q9Y4A8 694 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PCDHGC5Q9Y5F6 944 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 PCDHA5Q9Y5H7 936 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 MORC2Q9Y6X9 1032 aaPredicted RBP3.98□□□□□ -1.77
LINC01965-204ENST00000545549 IGSF10Q6WRI0 2623 aa3.98□□□□□ -1.77
LINC01965-204ENST00000545549 KIAA1217Q5T5P2 1943 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 PNMA6FA0A0J9YX94 578 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 MYADML2A6NDP7 307 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 EFCAB8A8MWE9 144 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 KIF28PB7ZC32 967 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 H3BQ06 376 aaPredicted RBP3.97□□□□□ -1.77
LINC01965-204ENST00000545549 J3QKU1 62 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 PES1O00541 588 aaKnown RBP3.97□□□□□ -1.77
LINC01965-204ENST00000545549 C2CD2LO14523 706 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 PSMA7O14818 248 aa3.97□□□□□ -1.77
LINC01965-204ENST00000545549 N4BP3O15049 544 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms