RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CRYBB1P53674 252 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TBC1D8BQ0IIM8 1120 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TRIM29Q14134 588 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TARBP2Q15633 366 aaKnown RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 XKR3Q5GH77 459 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 ATCAYQ86WG3 371 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 SLFN12Q8IYM2 578 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 METTL13Q8N6R0 699 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 GDPD5Q8WTR4 605 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TMEM40Q8WWA1 233 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 ATXN2LQ8WWM7 1075 aaKnown RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 KIF2CQ99661 725 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 SH2B1Q9NRF2 756 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 NRBP2Q9NSY0 501 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 MTUS1Q9ULD2 1270 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 PADI3Q9ULW8 664 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 RWDD3Q9Y3V2 267 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TRIP11Q15643 1979 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 DLL1O00548 723 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 ENPP3O14638 875 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 GPR182O15218 404 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 FZD6O60353 706 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 DKC1O60832 514 aaKnown RBP eCLIP8.6□□□□□ -1.031e-36■■□□□ 12.2
SNHG1-223ENST00000545440 GPR32O75388 356 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 RPS6KA5O75582 802 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 DGKIO75912 1065 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 VTNP04004 478 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 PDGFAP04085 211 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 CLCN3P51790 818 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 PSMC5P62195 406 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 HMGN5P82970 282 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 SPIRE1Q08AE8 756 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 COL19A1Q14993 1142 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 KIZQ2M2Z5 673 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 TMEM266Q2M3C6 531 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 EPC2Q52LR7 807 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 EARS2Q5JPH6 523 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 KRT40Q6A162 431 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 EFCAB12Q6NXP0 572 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 TRMT1LQ7Z2T5 733 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 DIS3L2Q8IYB7 885 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 PPM1EQ8WY54 764 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 HAS1Q92839 578 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 ZNF689Q96CS4 500 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 ZSCAN31Q96LW9 406 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 OSMRQ99650 979 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 C17orf80Q9BSJ5 609 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 TMX1Q9H3N1 280 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 BRD7Q9NPI1 651 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 C1orf112Q9NSG2 853 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 GINS2Q9Y248 185 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 NOC2LQ9Y3T9 749 aaKnown RBP8.6□□□□□ -1.03
SNHG1-223ENST00000545440 PPME1Q9Y570 386 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
SNHG1-223ENST00000545440 SPTBN5Q9NRC6 3674 aaKnown RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 A0A0C4DFX4 3053 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 SLC35F4A4IF30 521 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 SOBPA7XYQ1 873 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 BTBD18B2RXH4 712 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 H3BNC9 293 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 ZBTB39O15060 712 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 NEMFO60524 1076 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 DTNBO60941 627 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 STBD1O95210 358 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 LINC00271P0C7V0 271 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 STAG3L1P0CL83 205 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 QARSP47897 775 aaKnown RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 SARSP49591 514 aaKnown RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 GPC3P51654 580 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 RABEP1Q15276 862 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 CCDC85BQ15834 202 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 PTPROQ16827 1216 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 TIGD5Q53EQ6 642 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 RTN4RL1Q86UN2 441 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 TMEM192Q8IY95 271 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 LRRC71Q8N4P6 559 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 FIBCD1Q8N539 461 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 PNMA5Q96PV4 448 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 CEP89Q96ST8 783 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 LXNQ9BS40 222 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 COL25A1Q9BXS0 654 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-223ENST00000545440 ADAMTS10Q9H324 1103 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms