RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
RTN3-214ENST00000545432 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 GAD1Q99259 594 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 GIT1Q9Y2X7 761 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 MTF2Q9Y483 593 aaPredicted RBP16.47■□□□□ 0.23
RTN3-214ENST00000545432 LAMTOR5O43504 91 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
RTN3-214ENST00000545432 IFNAR1P17181 557 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 FSHRP23945 695 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 HOXA9P31269 272 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 CREMQ03060 361 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 MLF2Q15773 248 aaPredicted RBP16.46■□□□□ 0.23
RTN3-214ENST00000545432 FUT10Q6P4F1 479 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 GET4Q7L5D6 327 aaPredicted RBP16.46■□□□□ 0.23
RTN3-214ENST00000545432 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
RTN3-214ENST00000545432 PHKBQ93100 1093 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
RTN3-214ENST00000545432 ZSCAN32Q9NX65 697 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 FBXW11Q9UKB1 542 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 ZMYM2Q9UBW7 1377 aa16.46■□□□□ 0.23
RTN3-214ENST00000545432 SHISA7A6NL88 538 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 EML1O00423 815 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 TBC1D4O60343 1298 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 NR1I2O75469 434 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 TDP2O95551 362 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 MYBP10242 640 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 RFC5P40937 340 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
RTN3-214ENST00000545432 QARSP47897 775 aaKnown RBP16.45■□□□□ 0.22
RTN3-214ENST00000545432 EVCP57679 992 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 PPP2R5CQ13362 524 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
RTN3-214ENST00000545432 AMHR2Q16671 573 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 PLA2G4FQ68DD2 849 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 NELL2Q99435 816 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 RTKNQ9BST9 563 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 LTB4R2Q9NPC1 389 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 WRAP73Q9P2S5 460 aaPredicted RBP16.45■□□□□ 0.22
RTN3-214ENST00000545432 ZFHX4Q86UP3 3567 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
RTN3-214ENST00000545432 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 TSPAN1O60635 241 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 DKC1O60832 514 aaKnown RBP eCLIP16.44■□□□□ 0.22
RTN3-214ENST00000545432 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 MLH1P40692 756 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 SCNN1GP51170 649 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 PTENP60484 403 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 PFKPQ01813 784 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 LMNB2Q03252 620 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 CSTF1Q05048 431 aaKnown RBP16.44■□□□□ 0.22
RTN3-214ENST00000545432 NPY5RQ15761 445 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 MTSS1LQ765P7 747 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 C4orf19Q8IY42 314 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 ATRIPQ8WXE1 791 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 FGF13Q92913 245 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 ZFP42Q96MM3 310 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 CLSTN3Q9BQT9 956 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 FAM126AQ9BYI3 521 aaPredicted RBP16.44■□□□□ 0.22
RTN3-214ENST00000545432 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 PRMT8Q9NR22 394 aaPredicted RBP16.44■□□□□ 0.22
RTN3-214ENST00000545432 SPATA6Q9NWH7 488 aaPredicted RBP16.44■□□□□ 0.22
RTN3-214ENST00000545432 VPS54Q9P1Q0 977 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 NCDNQ9UBB6 729 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 ADAM28Q9UKQ2 775 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
RTN3-214ENST00000545432 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
RTN3-214ENST00000545432 ADRB1P08588 477 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 RTL10Q7L3V2 364 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 GRASPQ7Z6J2 395 aaPredicted RBP16.43■□□□□ 0.22
RTN3-214ENST00000545432 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
RTN3-214ENST00000545432 ZNF687Q8N1G0 1237 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 RNF149Q8NC42 400 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 PIK3R5Q8WYR1 880 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 CEP170P1Q96L14 293 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 KCNMB3Q9NPA1 279 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
RTN3-214ENST00000545432 HES2Q9Y543 173 aa16.43■□□□□ 0.22
RTN3-214ENST00000545432 F5P12259 2224 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 MAP1BP46821 2468 aaKnown RBP16.42■□□□□ 0.22
RTN3-214ENST00000545432 TDGF1P13385 188 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
RTN3-214ENST00000545432 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 ZBTB41Q5SVQ8 909 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 ST13P5Q8NFI4 369 aaPredicted RBP16.42■□□□□ 0.22
RTN3-214ENST00000545432 LNX1Q8TBB1 728 aaPredicted RBP16.42■□□□□ 0.22
RTN3-214ENST00000545432 FAM20AQ96MK3 541 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms