RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PHOSPHO2Q8TCD6 241 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 POMGNT1Q8WZA1 660 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LPPQ93052 612 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TOP1MTQ969P6 601 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MSTO1Q9BUK6 570 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CDT1Q9H211 546 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PRO3102Q9H379 93 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ELAC1Q9H777 363 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HES2Q9Y543 173 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZMYM2Q9UBW7 1377 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ZNF623O75123 536 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ITGA4P13612 1032 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PRCPP42785 496 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 OSTNP61366 133 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 MCL1Q07820 350 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 STIM1Q13586 685 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ARMCX5Q6P1M9 558 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HERC6Q8IVU3 1022 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 THNSL1Q8IYQ7 743 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TMEM63CQ9P1W3 806 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PARP2Q9UGN5 583 aa15.83■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ABLIM1O14639 778 aa15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ATF7P17544 494 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ABI1Q8IZP0 508 aa15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 YME1L1Q96TA2 773 aa15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SNTG2Q9NY99 539 aa15.82■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GBF1Q92538 1859 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 A0A0B4J269 797 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CLIC2O15247 247 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TGFB1I1O43294 461 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HOXA2O43364 376 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GJB5O95377 273 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 FGFR1P11362 822 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 AKAP5P24588 427 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ADSSP30520 456 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PPP1R2P41236 205 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SNRPFP62306 86 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SEZ6Q53EL9 994 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 MRPL10Q7Z7H8 261 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ZNF598Q86UK7 904 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CEP120Q8N960 986 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GOLGA5Q8TBA6 731 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CCDC94Q9BW85 323 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RSAD1Q9HA92 442 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 AGPAT3Q9NRZ7 376 aa15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 AGO2Q9UKV8 859 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 A0A1W2PPC1 479 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 MEIS3P2A8K0S8 358 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PSMA7O14818 248 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 OGTO15294 1046 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CALUO43852 315 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TLL1O43897 1013 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 BMP6P22004 513 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GARTP22102 1010 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GRM5P41594 1212 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RABGGTBP53611 331 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 YARSP54577 528 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 KYAT1Q16773 422 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 COBLL1Q53SF7 1204 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 KLHL10Q6JEL2 608 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GLB1LQ6UWU2 654 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CRIPAKQ8N1N5 446 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HELQQ8TDG4 1101 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CBWD1Q9BRT8 395 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 KCTD10Q9H3F6 313 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 UBN1Q9NPG3 1134 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CGNQ9P2M7 1197 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 INPP5FQ9Y2H2 1132 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 STYXL1Q9Y6J8 313 aa15.8■□□□□ 0.12
TNFRSF1A-216ENST00000543995 FNDC1Q4ZHG4 1894 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TBKBP1A7MCY6 615 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TULP1O00294 542 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PDXKO00764 312 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 DGKIO75912 1065 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RECQL4O94761 1208 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GATMP50440 423 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PAN2Q504Q3 1202 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 AGMOQ6ZNB7 445 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RBM43Q6ZSC3 357 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SAAL1Q96ER3 474 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ACAP3Q96P50 834 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 KLK14Q9P0G3 267 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GIT1Q9Y2X7 761 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 INSL6Q9Y581 213 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CITO14578 2027 aa15.79■□□□□ 0.12
TNFRSF1A-216ENST00000543995 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms